RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 ZNF785A8K8V0 405 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 CD5P06127 495 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 GP9P14770 177 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 RPL29P47914 159 aaKnown RBP12.8□□□□□ -0.36
FOXN4-203ENST00000423960 AP2S1P53680 142 aaPredicted RBP12.8□□□□□ -0.36
FOXN4-203ENST00000423960 GUCA2BQ16661 112 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 PXDC1Q5TGL8 231 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 SCGB1C1Q8TD33 95 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 PPP1R14BQ96C90 147 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 NEURL2Q9BR09 285 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 ARL6Q9H0F7 186 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 FBXL17Q9UF56 701 aa12.8□□□□□ -0.36
FOXN4-203ENST00000423960 RNF222A6NCQ9 220 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 BUB3O43684 328 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 S100A7P31151 101 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 OPCMLQ14982 345 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 FAM90A2PQ658T7 463 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 C16orf54Q6UWD8 224 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 Q6ZRG5 221 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 TCF24Q7RTU0 167 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 TCTE3Q8IZS6 198 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 STPG3Q8N7X2 389 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 ZNF709Q8N972 641 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 OR11H4Q8NGC9 324 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 NPCDR1Q9BY65 106 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 AURKAIP1Q9NWT8 199 aaPredicted RBP12.79□□□□□ -0.36
FOXN4-203ENST00000423960 DOK5Q9P104 306 aa12.79□□□□□ -0.36
FOXN4-203ENST00000423960 HMSDA8MTL9 139 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 TSPAN4O14817 238 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 ARPC5O15511 151 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 OR5G3P0C626 314 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 RPL11P62913 178 aaKnown RBP12.78□□□□□ -0.36
FOXN4-203ENST00000423960 PRR20EP86478 221 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 PRR20CP86479 221 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 PRR20DP86480 221 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 PRR20BP86481 221 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 PRR20AP86496 221 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 S100A7AQ86SG5 101 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 MRAPQ8TCY5 172 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 PRR25Q96S07 402 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 PARD6GQ9BYG4 376 aaPredicted RBP12.78□□□□□ -0.36
FOXN4-203ENST00000423960 MFFQ9GZY8 342 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
FOXN4-203ENST00000423960 ELOA3CA0A087WX78 387 aaPredicted RBP12.77□□□□□ -0.37
FOXN4-203ENST00000423960 C17orf112F2Z3M2 114 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 B2MP61769 119 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 PAFAH1B2P68402 229 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 PATE2Q6UY27 113 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 GLMPQ8WWB7 406 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 SLC39A9Q9NUM3 307 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.37
FOXN4-203ENST00000423960 IGKV3-7A0A075B6H7 116 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 HELTA6NFD8 242 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 ZNF98A6NK75 572 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 ZNF266Q14584 549 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 SPAG8Q99932 426 aaPredicted RBP12.76□□□□□ -0.37
FOXN4-203ENST00000423960 SLC25A39Q9BZJ4 359 aaPredicted RBP12.76□□□□□ -0.37
FOXN4-203ENST00000423960 ARV1Q9H2C2 271 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
FOXN4-203ENST00000423960 C10orf113Q5VZT2 155 aa12.75□□□□□ -0.37
FOXN4-203ENST00000423960 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
FOXN4-203ENST00000423960 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
FOXN4-203ENST00000423960 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
FOXN4-203ENST00000423960 SHANK2-AS3Q9BTD1 123 aa12.75□□□□□ -0.37
FOXN4-203ENST00000423960 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
FOXN4-203ENST00000423960 OR4C46A6NHA9 309 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 H3BRN7 92 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 DNASE2O00115 360 aaPredicted RBP12.74□□□□□ -0.37
FOXN4-203ENST00000423960 TAAR5O14804 337 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 SIGLEC15Q6ZMC9 328 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 LINC00305Q7Z4B0 112 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 GTSCR1Q86UQ5 136 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 WFDC3Q8IUB2 231 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 KCNRGQ8N5I3 272 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 PFDN5Q99471 154 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 SLC25A22Q9H936 323 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
FOXN4-203ENST00000423960 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
FOXN4-203ENST00000423960 A0A0D9SG52 128 aa12.73□□□□□ -0.37
FOXN4-203ENST00000423960 TFPI2P48307 235 aa12.73□□□□□ -0.37
FOXN4-203ENST00000423960 ZNF345Q14585 488 aa12.73□□□□□ -0.37
FOXN4-203ENST00000423960 LEMD1Q68G75 181 aa12.73□□□□□ -0.37
FOXN4-203ENST00000423960 RPL7L1Q6DKI1 246 aaKnown RBP12.73□□□□□ -0.37
FOXN4-203ENST00000423960 GATAD1Q8WUU5 269 aa12.73□□□□□ -0.37
FOXN4-203ENST00000423960 SCRT1Q9BWW7 348 aa12.73□□□□□ -0.37
FOXN4-203ENST00000423960 SORL1Q92673 2214 aa12.72□□□□□ -0.37
FOXN4-203ENST00000423960 K7EIL1 84 aa12.72□□□□□ -0.37
FOXN4-203ENST00000423960 C1QBP02746 253 aa12.72□□□□□ -0.37
FOXN4-203ENST00000423960 CD7P09564 240 aa12.72□□□□□ -0.37
FOXN4-203ENST00000423960 Q8N1Y9 231 aa12.72□□□□□ -0.37
FOXN4-203ENST00000423960 STXBP6Q8NFX7 210 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms