RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 KCNIP2Q9NS61 270 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 IGHV7-4-1A0A0J9YVY3 117 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 COX7A2P2O60397 106 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 HNRNPCP07910 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX55-203ENST00000421670 IGLL1P15814 213 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 NPPCP23582 126 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 CRYBB3P26998 211 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 PLP1P60201 277 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 FFAR4Q5NUL3 377 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 PATE2Q6UY27 113 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 Q6ZRG5 221 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 ST8SIA2Q92186 375 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 ARV1Q9H2C2 271 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 NOTCH1P46531 2555 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 HYPMO75409 117 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 PPP1R14BQ96C90 147 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 SLC25A32Q9H2D1 315 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 MRPL27Q9P0M9 148 aaKnown RBP11.91□□□□□ -0.5
DDX55-203ENST00000421670 MLXQ9UH92 298 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 TIMM9Q9Y5J7 89 aa11.91□□□□□ -0.5
DDX55-203ENST00000421670 LEMD1Q68G75 181 aa11.9□□□□□ -0.5
DDX55-203ENST00000421670 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
DDX55-203ENST00000421670 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
DDX55-203ENST00000421670 CHEK1O14757 476 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 C8orf88P0DMB2 117 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 PXDC1Q5TGL8 231 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 MORN5Q5VZ52 161 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 OR1L4Q8NGR5 311 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 DYNLRB2Q8TF09 96 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 MARC2Q969Z3 335 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 GNPNAT1Q96EK6 184 aaPredicted RBP11.89□□□□□ -0.51
DDX55-203ENST00000421670 SCRT1Q9BWW7 348 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 SLC25A39Q9BZJ4 359 aaPredicted RBP11.89□□□□□ -0.51
DDX55-203ENST00000421670 VSIRQ9H7M9 311 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 U3KQE9 123 aa11.89□□□□□ -0.51
DDX55-203ENST00000421670 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
DDX55-203ENST00000421670 RAB2AP61019 212 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 LINC00305Q7Z4B0 112 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 OR2G3Q8NGZ4 309 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 NARS2Q96I59 477 aaKnown RBP11.88□□□□□ -0.51
DDX55-203ENST00000421670 PFDN5Q99471 154 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 RNF2Q99496 336 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 SLC25A22Q9H936 323 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 DNAJC4Q9NNZ3 241 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 SIGLEC8Q9NYZ4 499 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 ELOA3CA0A087WX78 387 aaPredicted RBP11.88□□□□□ -0.51
DDX55-203ENST00000421670 H3BRN7 92 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 BUB3O43684 328 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 SPP1P10451 314 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 C9orf66Q5T8R8 295 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 SLC51BQ86UW2 128 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 SHANK2-AS3Q9BTD1 123 aa11.88□□□□□ -0.51
DDX55-203ENST00000421670 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
DDX55-203ENST00000421670 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
DDX55-203ENST00000421670 C4BPBP20851 252 aa11.87□□□□□ -0.51
DDX55-203ENST00000421670 EIF5AP63241 154 aaKnown RBP11.87□□□□□ -0.51
DDX55-203ENST00000421670 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
DDX55-203ENST00000421670 SPATA31B1PQ5VZV4 182 aa11.87□□□□□ -0.51
DDX55-203ENST00000421670 TMED6Q8WW62 240 aa11.87□□□□□ -0.51
DDX55-203ENST00000421670 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
DDX55-203ENST00000421670 A0A1W2PS18 150 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 EIF3GO75821 320 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDX55-203ENST00000421670 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 M6PRP20645 277 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 SERF2P84101 59 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 DEFB114Q30KQ6 69 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 ACOT6Q3I5F7 207 aaPredicted RBP11.86□□□□□ -0.51
DDX55-203ENST00000421670 CD300EQ496F6 205 aaPredicted RBP11.86□□□□□ -0.51
DDX55-203ENST00000421670 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 GATAD1Q8WUU5 269 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 GLMPQ8WWB7 406 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 GRAMD2BQ96HH9 432 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 TMEM231Q9H6L2 316 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 DNAH3Q8TD57 4116 aa11.86□□□□□ -0.51
DDX55-203ENST00000421670 IGKV3-7A0A075B6H7 116 aa11.85□□□□□ -0.51
DDX55-203ENST00000421670 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
DDX55-203ENST00000421670 IZUMO1RA6ND01 250 aa11.85□□□□□ -0.51
DDX55-203ENST00000421670 BMI1P35226 326 aa11.85□□□□□ -0.51
DDX55-203ENST00000421670 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
DDX55-203ENST00000421670 PFDN2Q9UHV9 154 aa11.85□□□□□ -0.51
DDX55-203ENST00000421670 G3V4G9 280 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 INSL3P51460 131 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 FAM122CQ6P4D5 195 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 MIR17HGQ75NE6 70 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 TCF24Q7RTU0 167 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 OR8I2Q8N0Y5 310 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 OR10G4Q8NGN3 311 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 OR10G9Q8NGN4 311 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms