RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 A8MWL6 223 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 IGLV2-23P01705 113 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 ERASQ7Z444 233 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 OR8B3Q8NGG8 313 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 ZNF596Q8TC21 504 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 TMEM70Q9BUB7 260 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 MCRIP2Q9BUT9 160 aaKnown RBP12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 K7EM74 188 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 CNTFRP26992 372 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 ZNF138P52744 262 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 LYZP61626 148 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 LINC00173Q6ZV60 143 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 STXBP6Q8NFX7 210 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 ABCA4P78363 2273 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 FSTL3O95633 263 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 CSN3P07498 182 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 THAP8Q8NA92 274 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 GTSF1Q8WW33 167 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 Q9H3A6 140 aa12.17□□□□□ -0.46
SEMA3B-203ENST00000419007 OR4C46A6NHA9 309 aa12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 CHEK1O14757 476 aa12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 CA7P43166 264 aa12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 BSPH1Q075Z2 132 aa12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 KLF5Q13887 457 aaPredicted RBP12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 ASCL2Q99929 193 aa12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 C7orf69Q9H7B7 122 aa12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 CRYABP02511 175 aaKnown RBP12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 OR4A5Q8NH83 315 aa12.16□□□□□ -0.46
SEMA3B-203ENST00000419007 OR2J3O76001 311 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 COL8A1P27658 744 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 RPL27AP46776 148 aaKnown RBP12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 TMEM178BH3BS89 294 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 MYCNOSP40205 109 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 PRNTQ86SH4 94 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 C5orf17Q8NAS9 161 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 NBASA2RRP1 2371 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 IGLC7A0M8Q6 106 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 CTSZQ9UBR2 303 aa12.15□□□□□ -0.46
SEMA3B-203ENST00000419007 A0A1B0GXF2 115 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 C16orf97H3BN30 126 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 CCL25O15444 150 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 TCRAP04437 139 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 EXOC3-AS1Q8N2X6 119 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 TPPP3Q9BW30 176 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 DYNLRB1Q9NP97 96 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 GOLT1AQ6ZVE7 132 aa12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
SEMA3B-203ENST00000419007 IGHV2-26A0A0B4J1V2 119 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 INS-IGF2F8WCM5 200 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 RBP4P02753 201 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 Q71RC1 249 aaPredicted RBP12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 PMCHL2Q9BQD1 86 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 MC5RP33032 325 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 ZNF738Q8NE65 137 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 TOMM40O96008 361 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 RBPMS2Q6ZRY4 209 aaKnown RBP12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 NUP37Q8NFH4 326 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
SEMA3B-203ENST00000419007 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 LOXP28300 417 aaPredicted RBP12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 HIGD1AQ9Y241 93 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 KLF12Q9Y4X4 402 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 GP9P14770 177 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 PLGLAQ15195 96 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 TRGV9Q99603 122 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 PPP1R14DQ9NXH3 145 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 IGHV1-8P0DP01 117 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 PSG1P11464 419 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 LGALS7P47929 136 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 SCNM1Q9BWG6 230 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
SEMA3B-203ENST00000419007 SYS1-DBNDD2H3BUS1 97 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 CEACAM4O75871 244 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 LTAP01374 205 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 HTR1DP28221 377 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 CEACAM8P31997 349 aaPredicted RBP12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 MPV17L2Q567V2 206 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 INSIG2Q9Y5U4 225 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 KLK10O43240 276 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 COX7A1P24310 79 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 VAMP3Q15836 100 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 Q6ZS92 163 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 OR4F17Q8NGA8 305 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
SEMA3B-203ENST00000419007 A0A0G2JNJ9 132 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 HSBP1L1C9JCN9 74 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms