RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 RPL12P30050 165 aaKnown RBP13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 CMC4P56277 68 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 CD81P60033 236 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 OR5C1Q8NGR4 320 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 MGST2Q99735 147 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 C19orf73Q9NVV2 129 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 HSPB11Q9Y547 144 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 IGHV3-66A0A0C4DH42 116 aa13.1□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 STPG3Q8N7X2 389 aa13.1□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 FBXL17Q9UF56 701 aa13.1□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 DNAH9Q9NYC9 4486 aa13.1□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 HYPMO75409 117 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 LINC00869P0C866 280 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 RPL29P47914 159 aaKnown RBP13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 CAMLGP49069 296 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PRR20EP86478 221 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PRR20CP86479 221 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PRR20DP86480 221 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PRR20BP86481 221 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PRR20AP86496 221 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 S100A7AQ86SG5 101 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 MS4A6AQ9H2W1 248 aa13.09□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 IGHV4-30-4P0DP06 118 aa13.08□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 ORM2P19652 201 aa13.08□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 GGTLC1Q9BX51 225 aa13.08□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 RNF24Q9Y225 148 aa13.08□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 UBE2L5PA0A1B0GUS4 154 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 ZNF98A6NK75 572 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 OR11H12B2RN74 326 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 OPCMLQ14982 345 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 Q5BKY6 102 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 SIGLEC15Q6ZMC9 328 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 Q6ZNX1 250 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 OR1B1Q8NGR6 318 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 AQP10Q96PS8 301 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 ATP5SQ99766 215 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 HIGD1AQ9Y241 93 aa13.07□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 ELOA3CA0A087WX78 387 aaPredicted RBP13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 K7EQG2 157 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 DNASE2O00115 360 aaPredicted RBP13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 RPL11P62913 178 aaKnown RBP13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 PATE2Q6UY27 113 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 LINC00322Q6ZN03 302 aaPredicted RBP13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 Q6ZRG5 221 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 PPP1R14BQ96C90 147 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 GPR82Q96P67 336 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 G3V3Q6 166 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 H3BRN7 92 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 FGF7P21781 194 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 CLINT1Q14677 625 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 ODF3L2Q3SX64 289 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 OR8I2Q8N0Y5 310 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 GBGT1Q8N5D6 347 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 NRN1Q9NPD7 142 aa13.05□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 IGKV3-7A0A075B6H7 116 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 OR5G3P0C626 314 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 FRMD6-AS1P0C7T7 363 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 MIC13Q5XKP0 118 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 DEFB125Q8N687 156 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 TMEM37Q8WXS4 190 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 TUBA4BQ9H853 241 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 TFPI2P48307 235 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 B2MP61769 119 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 OR1L4Q8NGR5 311 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 PFDN5Q99471 154 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 DNAJC4Q9NNZ3 241 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 KCNIP2Q9NS61 270 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 DOK5Q9P104 306 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 TNFSF18Q9UNG2 199 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
COMMD3-BMI1-201ENST00000417470 IFNA5P01569 189 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 NHLRC4P0CG21 123 aaPredicted RBP13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 GALR1P47211 349 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 INO80EQ8NBZ0 244 aaPredicted RBP13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 WFDC10AQ9H1F0 79 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 SRD5A3Q9H8P0 318 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 MAP6D1Q9H9H5 199 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 WFDC1Q9HC57 220 aa13.02□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 COX7A2P2O60397 106 aa13.01□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 MEOX2P50222 304 aa13.01□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 C10orf113Q5VZT2 155 aa13.01□□□□□ -0.33
COMMD3-BMI1-201ENST00000417470 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms