RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 CST7O76096 145 aa13.37□□□□□ -0.27
SEMA3B-201ENST00000416295 SULT1A1P50225 295 aa13.37□□□□□ -0.27
SEMA3B-201ENST00000416295 H2BFSP57053 126 aa13.37□□□□□ -0.27
SEMA3B-201ENST00000416295 E5RGE8 158 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 ORM2P19652 201 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 GATA2P23769 480 aaPredicted RBP13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 APOC4P55056 127 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 HBG1P69891 147 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 HBG2P69892 147 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 LRRC37A5PQ49AS3 106 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 APRG1Q8IVJ8 170 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 TMEM252Q8N6L7 170 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 DCANP1Q8TF63 244 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 TMEM147Q9BVK8 224 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 NRN1Q9NPD7 142 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 ALG5Q9Y673 324 aa13.36□□□□□ -0.27
SEMA3B-201ENST00000416295 IGSF23A1L1A6 192 aa13.35□□□□□ -0.27
SEMA3B-201ENST00000416295 S100A11P31949 105 aa13.35□□□□□ -0.27
SEMA3B-201ENST00000416295 TMEM182Q6ZP80 229 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-201ENST00000416295 S100A7AQ86SG5 101 aa13.35□□□□□ -0.27
SEMA3B-201ENST00000416295 ZNF546Q86UE3 836 aa13.35□□□□□ -0.27
SEMA3B-201ENST00000416295 OR1B1Q8NGR6 318 aa13.35□□□□□ -0.27
SEMA3B-201ENST00000416295 UQCC1Q9NVA1 299 aa13.35□□□□□ -0.27
SEMA3B-201ENST00000416295 NBEAL2Q6ZNJ1 2754 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 LINC00869P0C866 280 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 PET100P0DJ07 73 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 DEFB131AP59861 70 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 RAP2BP61225 183 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 RAB31Q13636 194 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 OR8I2Q8N0Y5 310 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 FAM24BQ8N5W8 94 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 STPG3Q8N7X2 389 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 PPP1R1CQ8WVI7 109 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 SLC25A31Q9H0C2 315 aa13.34□□□□□ -0.27
SEMA3B-201ENST00000416295 KIR2DL5BA0A0G2JN68 375 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 KIR2DL5BA0A0G2JPC4 375 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 AGPAT2O15120 278 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 PLP1P60201 277 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 RGS21Q2M5E4 152 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 VWC2Q2TAL6 325 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 PXDC1Q5TGL8 231 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 KIR2DL5AQ8N109 375 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 KIR2DL5BQ8NHK3 375 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 SEPSECSQ9HD40 501 aaKnown RBP13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 OR5AC2Q9NZP5 309 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 HIGD1AQ9Y241 93 aa13.33□□□□□ -0.28
SEMA3B-201ENST00000416295 STAB2Q8WWQ8 2551 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 ZNF98A6NK75 572 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 UBE2CO00762 179 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 HYPMO75409 117 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 ZNF688P0C7X2 276 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 ZNF124Q15973 351 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 ATP6V1FQ16864 119 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 GPR82Q96P67 336 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 MGST2Q99735 147 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 DOK5Q9P104 306 aa13.32□□□□□ -0.28
SEMA3B-201ENST00000416295 H0YIZ8 118 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 OR5G3P0C626 314 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 RPL35AP18077 110 aaKnown RBP13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 GALR1P47211 349 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 SAMD13Q5VXD3 122 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 LEMD1Q68G75 181 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 SLC25A39Q9BZJ4 359 aaPredicted RBP13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 SLC25A22Q9H936 323 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 RNF24Q9Y225 148 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
SEMA3B-201ENST00000416295 UBE2L5PA0A1B0GUS4 154 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 H3BRN7 92 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 MPC2O95563 127 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 CAMLGP49069 296 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 BAXQ07812 192 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 PSMG4Q5JS54 123 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 Q6ZWC4 215 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 SHANK2-AS3Q9BTD1 123 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 MED28Q9H204 178 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 RETNQ9HD89 108 aa13.3□□□□□ -0.28
SEMA3B-201ENST00000416295 ID1P41134 155 aa13.29□□□□□ -0.28
SEMA3B-201ENST00000416295 MEOX2P50222 304 aa13.29□□□□□ -0.28
SEMA3B-201ENST00000416295 STHQ8IWL8 128 aa13.29□□□□□ -0.28
SEMA3B-201ENST00000416295 SCRT1Q9BWW7 348 aa13.29□□□□□ -0.28
SEMA3B-201ENST00000416295 SLC25A32Q9H2D1 315 aa13.29□□□□□ -0.28
SEMA3B-201ENST00000416295 KMT2CQ8NEZ4 4911 aaKnown RBP13.29□□□□□ -0.28
SEMA3B-201ENST00000416295 MPDU1O75352 247 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 CXCL3P19876 107 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 PSMB3P49720 205 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 NHLH2Q02577 135 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 OR5C1Q8NGR4 320 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 RNF126Q9BV68 326 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 CSTL1Q9H114 145 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
SEMA3B-201ENST00000416295 ELOA3CA0A087WX78 387 aaPredicted RBP13.27□□□□□ -0.29
SEMA3B-201ENST00000416295 C3orf84H3BNL1 204 aa13.27□□□□□ -0.29
SEMA3B-201ENST00000416295 COX7A2P2O60397 106 aa13.27□□□□□ -0.29
SEMA3B-201ENST00000416295 RPL7P18124 248 aaKnown RBP13.27□□□□□ -0.29
SEMA3B-201ENST00000416295 FGF7P21781 194 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms