RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SMCO3A2RU48 225 aa15.46■□□□□ 0.07
PTPRU-203ENST00000415600 REG1AP05451 166 aa15.46■□□□□ 0.07
PTPRU-203ENST00000415600 WT1-ASQ06250 92 aa15.46■□□□□ 0.07
PTPRU-203ENST00000415600 CCDC140Q96MF4 163 aa15.46■□□□□ 0.07
PTPRU-203ENST00000415600 VSIRQ9H7M9 311 aa15.46■□□□□ 0.07
PTPRU-203ENST00000415600 TRAV1-1A0A0B4J248 108 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 IZUMO1RA6ND01 250 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 AGPAT2O15120 278 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 IGHV3-23P01764 117 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 HBE1P02100 147 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 MBP02144 154 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 CLEC3BP05452 202 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 SRSF3P84103 164 aaKnown RBP15.45■□□□□ 0.06
PTPRU-203ENST00000415600 IGLC7A0M8Q6 106 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 A8MWP6 167 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 CD5P06127 495 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 CBLN1P23435 193 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 SUB1P53999 127 aaKnown RBP eCLIP15.45■□□□□ 0.06
PTPRU-203ENST00000415600 ELLP55199 621 aaPredicted RBP15.45■□□□□ 0.06
PTPRU-203ENST00000415600 C19orf35Q6ZS72 473 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 MBD3L1Q8WWY6 194 aa15.45■□□□□ 0.06
PTPRU-203ENST00000415600 HUWE1Q7Z6Z7 4374 aaKnown RBP15.44■□□□□ 0.06
PTPRU-203ENST00000415600 TMEM218A2RU14 115 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 OR13C7P0DN81 318 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 RAB2AP61019 212 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 AKR1C1Q04828 323 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 CCDC28AQ8IWP9 274 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 ZNF114Q8NC26 417 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 OR1L6Q8NGR2 347 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 VN1R17PQ8TDU5 208 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 SCRT1Q9BWW7 348 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 TREM1Q9NP99 234 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 UFC1Q9Y3C8 167 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 DMRT1Q9Y5R6 373 aa15.44■□□□□ 0.06
PTPRU-203ENST00000415600 OPRK1P41145 380 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 ZNF726P1Q15940 193 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 GUK1Q16774 197 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 FFAR4Q5NUL3 377 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 RNASEH2CQ8TDP1 164 aaKnown RBP15.43■□□□□ 0.06
PTPRU-203ENST00000415600 SFT2D1Q8WV19 159 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 NARS2Q96I59 477 aaKnown RBP15.43■□□□□ 0.06
PTPRU-203ENST00000415600 MGST2Q99735 147 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 TMEM231Q9H6L2 316 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 KCNIP2Q9NS61 270 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 S4R3C0 116 aa15.43■□□□□ 0.06
PTPRU-203ENST00000415600 ZNF785A8K8V0 405 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 GPR183P32249 361 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 GPX4P36969 197 aaPredicted RBP15.42■□□□□ 0.06
PTPRU-203ENST00000415600 PVRIGQ6DKI7 326 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 TEPPQ6URK8 271 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 ADAMTSL5Q6ZMM2 481 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 IL17DQ8TAD2 202 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 CACNG8Q8WXS5 425 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 PBDC1Q9BVG4 233 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 GGTLC1Q9BX51 225 aa15.42■□□□□ 0.06
PTPRU-203ENST00000415600 OR11H12B2RN74 326 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 TMEM144Q7Z5S9 345 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 RPP25LQ8N5L8 163 aaKnown RBP15.41■□□□□ 0.06
PTPRU-203ENST00000415600 ZNF502Q8TBZ5 544 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 ATP6V0BQ99437 205 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 TRAV25A0A0B4J276 109 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 A0A1B0GV50 99 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 TMEM213A2RRL7 107 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 M6PRP20645 277 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 CCL20P78556 96 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 PEA15Q15121 130 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 ACOT6Q3I5F7 207 aaPredicted RBP15.41■□□□□ 0.06
PTPRU-203ENST00000415600 RBPMS2Q6ZRY4 209 aaKnown RBP15.41■□□□□ 0.06
PTPRU-203ENST00000415600 SSX7Q7RTT5 188 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 OR10G4Q8NGN3 311 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 OR10G9Q8NGN4 311 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 OR10G7Q8NGN6 311 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 SRD5A3Q9H8P0 318 aa15.41■□□□□ 0.06
PTPRU-203ENST00000415600 RAB31Q13636 194 aa15.4■□□□□ 0.06
PTPRU-203ENST00000415600 SMDT1Q9H4I9 107 aa15.4■□□□□ 0.06
PTPRU-203ENST00000415600 EDA2RQ9HAV5 297 aa15.4■□□□□ 0.06
PTPRU-203ENST00000415600 GAR1Q9NY12 217 aaKnown RBP15.4■□□□□ 0.06
PTPRU-203ENST00000415600 MRPL27Q9P0M9 148 aaKnown RBP15.4■□□□□ 0.06
PTPRU-203ENST00000415600 PXMP4Q9Y6I8 212 aa15.4■□□□□ 0.06
PTPRU-203ENST00000415600 CTXND1A0A1B0GTU2 59 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 MAP1LC3B2A6NCE7 125 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 CD7P09564 240 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 GAMTQ14353 236 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 C10orf91Q5T1B1 145 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 DEFB125Q8N687 156 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 SLC35E1Q96K37 410 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 ACTR3CQ9C0K3 210 aaPredicted RBP15.39■□□□□ 0.05
PTPRU-203ENST00000415600 MAP1LC3BQ9GZQ8 125 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 EIF5A2Q9GZV4 153 aaKnown RBP15.39■□□□□ 0.05
PTPRU-203ENST00000415600 SLC39A9Q9NUM3 307 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 F11RQ9Y624 299 aaKnown RBP15.39■□□□□ 0.05
PTPRU-203ENST00000415600 DNAH7Q8WXX0 4024 aa15.39■□□□□ 0.05
PTPRU-203ENST00000415600 TGOLN2O43493 480 aa15.38■□□□□ 0.05
PTPRU-203ENST00000415600 ADCYAP1P18509 176 aa15.38■□□□□ 0.05
PTPRU-203ENST00000415600 RPL29P47914 159 aaKnown RBP15.38■□□□□ 0.05
PTPRU-203ENST00000415600 LCN15Q6UWW0 184 aa15.38■□□□□ 0.05
PTPRU-203ENST00000415600 TMEM61Q8N0U2 210 aa15.38■□□□□ 0.05
PTPRU-203ENST00000415600 SEC11CQ9BY50 192 aa15.38■□□□□ 0.05
PTPRU-203ENST00000415600 CARHSP1Q9Y2V2 147 aaKnown RBP15.38■□□□□ 0.05
PTPRU-203ENST00000415600 RBFOX3A6NFN3 312 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms