RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 LINC00869P0C866 280 aa12.34□□□□□ -0.43
LINC00398-201ENST00000414407 GATA2P23769 480 aaPredicted RBP12.34□□□□□ -0.43
LINC00398-201ENST00000414407 CAMLGP49069 296 aa12.34□□□□□ -0.43
LINC00398-201ENST00000414407 CD81P60033 236 aa12.34□□□□□ -0.43
LINC00398-201ENST00000414407 S100A7AQ86SG5 101 aa12.34□□□□□ -0.43
LINC00398-201ENST00000414407 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
LINC00398-201ENST00000414407 FAM110AQ9BQ89 295 aa12.34□□□□□ -0.43
LINC00398-201ENST00000414407 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.44
LINC00398-201ENST00000414407 HYPMO75409 117 aa12.33□□□□□ -0.44
LINC00398-201ENST00000414407 CD7P09564 240 aa12.33□□□□□ -0.44
LINC00398-201ENST00000414407 ORM2P19652 201 aa12.33□□□□□ -0.44
LINC00398-201ENST00000414407 CMC4P56277 68 aaPredicted RBP12.33□□□□□ -0.44
LINC00398-201ENST00000414407 OR2T35Q8NGX2 323 aa12.33□□□□□ -0.44
LINC00398-201ENST00000414407 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
LINC00398-201ENST00000414407 RPL29P47914 159 aaKnown RBP12.32□□□□□ -0.44
LINC00398-201ENST00000414407 RPL11P62913 178 aaKnown RBP12.32□□□□□ -0.44
LINC00398-201ENST00000414407 PRR20EP86478 221 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 PRR20CP86479 221 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 PRR20DP86480 221 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 PRR20BP86481 221 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 PRR20AP86496 221 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 Q5BKY6 102 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 Q6ZNX1 250 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 STPG3Q8N7X2 389 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 OR1B1Q8NGR6 318 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 PPP1R14BQ96C90 147 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 ATP5SQ99766 215 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 GGTLC1Q9BX51 225 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 MS4A6AQ9H2W1 248 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
LINC00398-201ENST00000414407 DNASE2O00115 360 aaPredicted RBP12.31□□□□□ -0.44
LINC00398-201ENST00000414407 FGF7P21781 194 aa12.31□□□□□ -0.44
LINC00398-201ENST00000414407 CLINT1Q14677 625 aa12.31□□□□□ -0.44
LINC00398-201ENST00000414407 SIGLEC15Q6ZMC9 328 aa12.31□□□□□ -0.44
LINC00398-201ENST00000414407 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
LINC00398-201ENST00000414407 HIGD1AQ9Y241 93 aa12.31□□□□□ -0.44
LINC00398-201ENST00000414407 ELOA3CA0A087WX78 387 aaPredicted RBP12.3□□□□□ -0.44
LINC00398-201ENST00000414407 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 OR11H12B2RN74 326 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 IGHV4-30-4P0DP06 118 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 OPCMLQ14982 345 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 Q6ZRG5 221 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 GBGT1Q8N5D6 347 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 GPR82Q96P67 336 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 B9D2Q9BPU9 175 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 NPCDR1Q9BY65 106 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
LINC00398-201ENST00000414407 WDR61Q9GZS3 305 aaKnown RBP12.3□□□□□ -0.44
LINC00398-201ENST00000414407 ARL6Q9H0F7 186 aa12.3□□□□□ -0.44
LINC00398-201ENST00000414407 IGKV3-7A0A075B6H7 116 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 H3BRN7 92 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 OR5G3P0C626 314 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 SHANK2-AS3Q9BTD1 123 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 SLC25A39Q9BZJ4 359 aaPredicted RBP12.29□□□□□ -0.44
LINC00398-201ENST00000414407 SEPSECSQ9HD40 501 aaKnown RBP12.29□□□□□ -0.44
LINC00398-201ENST00000414407 NRN1Q9NPD7 142 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 KCNIP2Q9NS61 270 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 DOK5Q9P104 306 aa12.29□□□□□ -0.44
LINC00398-201ENST00000414407 G3V3Q6 166 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 K7EQG2 157 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 IFNA5P01569 189 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 TFPI2P48307 235 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 B2MP61769 119 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 ODF3L2Q3SX64 289 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 MIC13Q5XKP0 118 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 INO80EQ8NBZ0 244 aaPredicted RBP12.28□□□□□ -0.44
LINC00398-201ENST00000414407 STXBP6Q8NFX7 210 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 OR1L4Q8NGR5 311 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 DCANP1Q8TF63 244 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 TUBA4BQ9H853 241 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 SLC39A9Q9NUM3 307 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 TNFSF18Q9UNG2 199 aa12.28□□□□□ -0.44
LINC00398-201ENST00000414407 C17orf112F2Z3M2 114 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 COX7A2P2O60397 106 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 FRMD6-AS1P0C7T7 363 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 GALR1P47211 349 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 WFDC3Q8IUB2 231 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 DEFB125Q8N687 156 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 ZNF709Q8N972 641 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 TMEM37Q8WXS4 190 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 PFDN5Q99471 154 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 PXMP4Q9Y6I8 212 aa12.27□□□□□ -0.45
LINC00398-201ENST00000414407 FXYD6-FXYD2A0A087WZ82 144 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 SAMD13Q5VXD3 122 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 C10orf113Q5VZT2 155 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 LINC00322Q6ZN03 302 aaPredicted RBP12.26□□□□□ -0.45
LINC00398-201ENST00000414407 SCGB1C1Q8TD33 95 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 GATAD1Q8WUU5 269 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 SMIM3Q9BZL3 60 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 SRD5A3Q9H8P0 318 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 SLC25A22Q9H936 323 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 WFDC1Q9HC57 220 aa12.26□□□□□ -0.45
LINC00398-201ENST00000414407 PRKDCP78527 4128 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms