RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 PPBPP02775 128 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 DLX1P56177 255 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.58
MINDY4-202ENST00000409881 TIGITQ495A1 244 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 CIARTQ8N365 385 aaPredicted RBP11.46□□□□□ -0.58
MINDY4-202ENST00000409881 PNKDQ8N490 385 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 KIR3DL3Q8N743 410 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 OR4A16Q8NH70 328 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 LEAP2Q969E1 77 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 LINC00574Q9H8X3 128 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 OSTCQ9NRP0 149 aa11.46□□□□□ -0.58
MINDY4-202ENST00000409881 TECRQ9NZ01 308 aaKnown RBP11.46□□□□□ -0.58
MINDY4-202ENST00000409881 ITPR3Q14573 2671 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
MINDY4-202ENST00000409881 LOXL3P58215 753 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 UTF1Q5T230 341 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 IBA57Q5T440 356 aaKnown RBP11.45□□□□□ -0.58
MINDY4-202ENST00000409881 LINC01356Q8N9X3 169 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 NHLRC2Q8NBF2 726 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 NPVFQ9HCQ7 196 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 JPT1Q9UK76 154 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 LSM4Q9Y4Z0 139 aaKnown RBP11.45□□□□□ -0.58
MINDY4-202ENST00000409881 H0YJW9 148 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 IGHV1-8P0DP01 117 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 PSG1P11464 419 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 COX19Q49B96 90 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 MPV17L2Q567V2 206 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 PRR31Q5SQ13 230 aa11.45□□□□□ -0.58
MINDY4-202ENST00000409881 TET2Q6N021 2002 aaPredicted RBP11.45□□□□□ -0.58
MINDY4-202ENST00000409881 CR1P17927 2039 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 MYO9AB2RTY4 2548 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 WNK2Q9Y3S1 2297 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 SMIM27A0A1W2PRY6 76 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 AREGP15514 252 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 CST9LQ9H4G1 147 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 ZNF331Q9NQX6 463 aaPredicted RBP11.44□□□□□ -0.58
MINDY4-202ENST00000409881 INSIG2Q9Y5U4 225 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 LOC102724200A0A096LPH7 203 aaPredicted RBP11.44□□□□□ -0.58
MINDY4-202ENST00000409881 M0R1W7 72 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 IGHV4-31P0DP07 118 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 UBE2G1P62253 170 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 RNASEKQ6P5S7 137 aaKnown RBP11.44□□□□□ -0.58
MINDY4-202ENST00000409881 HSD17B10Q99714 261 aaKnown RBP11.44□□□□□ -0.58
MINDY4-202ENST00000409881 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
MINDY4-202ENST00000409881 ISLRO14498 428 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 TGFAP01135 160 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 IGLV2-8P01709 118 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 RBP4P02753 201 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 LINC00869P0C866 280 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 COX7A1P24310 79 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 OCIAD2Q56VL3 154 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 TEPPQ6URK8 271 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 FAM216AQ8WUB2 273 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 TMEM186Q96B77 213 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
MINDY4-202ENST00000409881 IZUMO1RA6ND01 250 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 TAX1BP3O14907 124 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 BPIFB3P59826 476 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 RPL8P62917 257 aaKnown RBP11.43□□□□□ -0.58
MINDY4-202ENST00000409881 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 VMO1Q7Z5L0 202 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 WASHC3Q9Y3C0 194 aa11.43□□□□□ -0.58
MINDY4-202ENST00000409881 GGTLC3B5MD39 225 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 PROP1O75360 226 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 TOX4O94842 621 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 OR4A47Q6IF82 309 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 SIRPDQ9H106 197 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 TMEM133Q9H2Q1 129 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 RHOGP84095 191 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 TNFRSF19Q9NS68 423 aa11.42□□□□□ -0.58
MINDY4-202ENST00000409881 OR7C2O60412 319 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 PRTN3P24158 256 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 DUTP33316 252 aaKnown RBP11.41□□□□□ -0.58
MINDY4-202ENST00000409881 MFAP2P55001 183 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 PAX8Q06710 450 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 KLRD1Q13241 179 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 NUDT10Q8NFP7 164 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 SSBP4Q9BWG4 385 aaPredicted RBP11.41□□□□□ -0.58
MINDY4-202ENST00000409881 ZNRD1Q9P1U0 126 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 TCF19Q9Y242 345 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.41□□□□□ -0.58
MINDY4-202ENST00000409881 SH2D7A6NKC9 451 aaPredicted RBP11.41□□□□□ -0.58
MINDY4-202ENST00000409881 NUDT3O95989 172 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 GATA2P23769 480 aaPredicted RBP11.41□□□□□ -0.58
MINDY4-202ENST00000409881 GPR12P47775 334 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 C1orf122Q6ZSJ8 110 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 ZNF503Q96F45 646 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 C7orf69Q9H7B7 122 aa11.41□□□□□ -0.58
MINDY4-202ENST00000409881 FLNAP21333 2647 aaKnown RBP11.4□□□□□ -0.58
MINDY4-202ENST00000409881 ZNF134P52741 427 aa11.4□□□□□ -0.58
MINDY4-202ENST00000409881 RAB31Q13636 194 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms