RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 C1orf194Q5T5A4 169 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 ZNF546Q86UE3 836 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 OR1B1Q8NGR6 318 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 PPP1R1CQ8WVI7 109 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 GGTLC1Q9BX51 225 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 UQCC1Q9NVA1 299 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 RNF24Q9Y225 148 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 U3KQK5 164 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 COL7A1Q02388 2944 aa8.13□□□□□ -1.11
CHMP3-205ENST00000409810 LINC00869P0C866 280 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 ORM2P19652 201 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 BAXQ07812 192 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 ARL16Q0P5N6 197 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 HAGHQ16775 308 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 ATP6V1FQ16864 119 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 PXDC1Q5TGL8 231 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 TM2D3Q9BRN9 247 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 MED28Q9H204 178 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
CHMP3-205ENST00000409810 UBE2L5PA0A1B0GUS4 154 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 IGSF23A1L1A6 192 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 RBMY1BA6NDE4 496 aaKnown RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 RBMY1EA6NEQ0 496 aaKnown RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 K7EQG2 157 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 AGPAT2O15120 278 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 HYPMO75409 117 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 MPC2O95563 127 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 RBMY1DP0C7P1 496 aaKnown RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 GATA2P23769 480 aaPredicted RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 GALR1P47211 349 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 APOC4P55056 127 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 PLP1P60201 277 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 SNRPD3P62318 126 aaKnown RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 VWC2Q2TAL6 325 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 LINC00322Q6ZN03 302 aaPredicted RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 OR8I2Q8N0Y5 310 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 GPR82Q96P67 336 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 SEPSECSQ9HD40 501 aaKnown RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 NRN1Q9NPD7 142 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 HIGD1AQ9Y241 93 aa8.11□□□□□ -1.11
CHMP3-205ENST00000409810 HUWE1Q7Z6Z7 4374 aaKnown RBP8.11□□□□□ -1.11
CHMP3-205ENST00000409810 ZNF98A6NK75 572 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 MPDU1O75352 247 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 OR5G3P0C626 314 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 CAMLGP49069 296 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 DEFB131AP59861 70 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.11
CHMP3-205ENST00000409810 TMEM182Q6ZP80 229 aaPredicted RBP8.1□□□□□ -1.11
CHMP3-205ENST00000409810 Q6ZRG5 221 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 STPG3Q8N7X2 389 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 DCANP1Q8TF63 244 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 ASB13Q8WXK3 278 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 RCHY1Q96PM5 261 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 MGST2Q99735 147 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 SLC25A22Q9H936 323 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 DOK5Q9P104 306 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 WDR83OSQ9Y284 106 aa8.1□□□□□ -1.11
CHMP3-205ENST00000409810 AGRNO00468 2067 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 KIR2DL5BA0A0G2JN68 375 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 KIR2DL5BA0A0G2JPC4 375 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 H3BRN7 92 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 UBE2CO00762 179 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 ZNF688P0C7X2 276 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 FGF7P21781 194 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 ID1P41134 155 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 MEOX2P50222 304 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 FGL1Q08830 312 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 OXA1LQ15070 435 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 APRG1Q8IVJ8 170 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 KIR2DL5AQ8N109 375 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 OR5C1Q8NGR4 320 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 KIR2DL5BQ8NHK3 375 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 THAP6Q8TBB0 222 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 CITED4Q96RK1 184 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 SLC25A39Q9BZJ4 359 aaPredicted RBP8.09□□□□□ -1.11
CHMP3-205ENST00000409810 ARL6Q9H0F7 186 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 MBD2Q9UBB5 411 aa8.09□□□□□ -1.11
CHMP3-205ENST00000409810 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
CHMP3-205ENST00000409810 H0YIZ8 118 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 COX7A2P2O60397 106 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 RPL35AP18077 110 aaKnown RBP8.08□□□□□ -1.12
CHMP3-205ENST00000409810 RPL7P18124 248 aaKnown RBP8.08□□□□□ -1.12
CHMP3-205ENST00000409810 CXCL3P19876 107 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 NHLH2Q02577 135 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 FCN2Q15485 313 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 STHQ8IWL8 128 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 FAM24BQ8N5W8 94 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 OR1L4Q8NGR5 311 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 WWC2-AS2Q96NR7 200 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 PFDN5Q99471 154 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 SHANK2-AS3Q9BTD1 123 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 ARV1Q9H2C2 271 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 SLC25A32Q9H2D1 315 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 KCNIP2Q9NS61 270 aa8.08□□□□□ -1.12
CHMP3-205ENST00000409810 GIPP09681 153 aaPredicted RBP8.07□□□□□ -1.12
CHMP3-205ENST00000409810 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
CHMP3-205ENST00000409810 RPL12P30050 165 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms