RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PRR20BP86481 221 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 PRR20AP86496 221 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 UNQ5815/PRO19632Q6UWF5 114 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 FAM168AQ92567 244 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 HNRNPA3P51991 378 aaKnown RBP10.81□□□□□ -0.68
COL6A2-204ENST00000409416 FXYD7P58549 80 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 WT1-ASQ06250 92 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 EXOC3-AS1Q8N2X6 119 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 FBXL7Q9UJT9 491 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 CORTO00230 105 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 CIDEAO60543 219 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 YPEL3P61236 119 aaPredicted RBP10.8□□□□□ -0.68
COL6A2-204ENST00000409416 PAFAH1B2P68402 229 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 ST6GALNAC6Q969X2 333 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 BORCS7Q96B45 105 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 AMMECR1Q9Y4X0 333 aaPredicted RBP10.8□□□□□ -0.68
COL6A2-204ENST00000409416 A0A1W2PN81 502 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 APCSP02743 223 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 TMPRSS3P57727 454 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 RNF114Q9Y508 228 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 GOSR1O95249 250 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 OR4C13Q8NGP0 309 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 ZNF503Q96F45 646 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 NRN1Q9NPD7 142 aa10.8□□□□□ -0.68
COL6A2-204ENST00000409416 RNASE2P10153 161 aaKnown RBP10.79□□□□□ -0.68
COL6A2-204ENST00000409416 FCGR2BP31994 310 aaPredicted RBP10.79□□□□□ -0.68
COL6A2-204ENST00000409416 SUB1P53999 127 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL6A2-204ENST00000409416 RUSC1-AS1Q66K80 236 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 FNDC4Q9H6D8 234 aaPredicted RBP10.79□□□□□ -0.68
COL6A2-204ENST00000409416 TIMM23O14925 209 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 HSBP1O75506 76 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 ZNF138P52744 262 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 LINC00310P59036 64 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 CD69Q07108 199 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 GAGE1Q13065 139 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 GOLT1AQ6ZVE7 132 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 PDPNQ86YL7 162 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 Q8NA96 180 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 WASHC3Q9Y3C0 194 aa10.79□□□□□ -0.68
COL6A2-204ENST00000409416 LY6EQ16553 131 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 SPATA45Q537H7 98 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 MAPK1IP1LQ8NDC0 245 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 COL27A1Q8IZC6 1860 aaPredicted RBP10.78□□□□□ -0.68
COL6A2-204ENST00000409416 PTPRBP23467 1997 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 A1L4Q6 167 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 C9JCJ5 164 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 ITGB1BP1O14713 200 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 AMY1AP04745 511 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 ITPR1Q14643 2758 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 IGLV3-9A0A075B6K5 115 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 DLL1O00548 723 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 LHBP01229 141 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 PPOXP50336 477 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 WDR73Q6P4I2 378 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 CDC42EP3Q9UKI2 254 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 ZANQ9Y493 2812 aa10.78□□□□□ -0.68
COL6A2-204ENST00000409416 LOC389332A0A1B0GUA5 103 aa10.77□□□□□ -0.68
COL6A2-204ENST00000409416 A0A1W2PPI3 338 aa10.77□□□□□ -0.68
COL6A2-204ENST00000409416 H0YJW9 148 aa10.77□□□□□ -0.68
COL6A2-204ENST00000409416 ISLRO14498 428 aa10.77□□□□□ -0.68
COL6A2-204ENST00000409416 TPTE2P1Q5T6R2 138 aa10.77□□□□□ -0.68
COL6A2-204ENST00000409416 WFDC3Q8IUB2 231 aa10.77□□□□□ -0.68
COL6A2-204ENST00000409416 M0R3E3 92 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 OR2J3O76001 311 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 TMEM249Q2WGJ8 235 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 ZNF672Q499Z4 452 aaPredicted RBP10.77□□□□□ -0.69
COL6A2-204ENST00000409416 SLC25A48Q6ZT89 311 aaKnown RBP10.77□□□□□ -0.69
COL6A2-204ENST00000409416 TMEM219Q86XT9 240 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.77□□□□□ -0.69
COL6A2-204ENST00000409416 RNF2Q99496 336 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 MIEN1Q9BRT3 115 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 LINC00312Q9Y6C7 94 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 CGB3P0DN86 165 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 CGB7P0DN87 165 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 CX3CL1P78423 397 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 C11orf52Q96A22 123 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 TIMD4Q96H15 378 aa10.77□□□□□ -0.69
COL6A2-204ENST00000409416 SNAI2O43623 268 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 PPIFP30405 207 aaKnown RBP10.76□□□□□ -0.69
COL6A2-204ENST00000409416 UQCRFS1P47985 274 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 SLAQ13239 276 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 TMEM136Q6ZRR5 245 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 GNG7O60262 68 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 IL4P05112 153 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 GPX1P07203 203 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 ZNF738Q8NE65 137 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 WFDC12Q8WWY7 111 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 RASL11BQ9BPW5 248 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 GNB1LQ9BYB4 327 aa10.76□□□□□ -0.69
COL6A2-204ENST00000409416 ANKRD17O75179 2603 aaKnown RBP10.76□□□□□ -0.69
COL6A2-204ENST00000409416 A0A1W2PS18 150 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 BMPR1BO00238 502 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 IGHV1-8P0DP01 117 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 LOXP28300 417 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms