RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 RRNAD1Q96FB5 475 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 TMEM56Q96MV1 263 aa9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 SLC5A7Q9GZV3 580 aa9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 TMEM222Q9H0R3 208 aa9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 SLC25A32Q9H2D1 315 aa9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 TMED3Q9Y3Q3 217 aa9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 TMEM56-RWDD3S4R434 201 aa9.17□□□□□ -0.94
CHRNA1-203ENST00000409219 FAT1Q14517 4588 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 PIGBOS1A0A0B4J2F0 54 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 C3orf85A0A1B0GTC6 90 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 ST8SIA3O43173 380 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 TNFSF12O43508 249 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 RLN2P04090 185 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 CD5P06127 495 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 FGF2P09038 288 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 NPY1RP25929 384 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 NUP62P37198 522 aaPredicted RBP9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 THOC7Q6I9Y2 204 aaKnown RBP9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 SPAG16Q8N0X2 631 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 OR1S1Q8NH92 325 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 IL22RA2Q969J5 263 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 VSIRQ9H7M9 311 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 OR5AC2Q9NZP5 309 aa9.16□□□□□ -0.94
CHRNA1-203ENST00000409219 KNCNA6PVL3 124 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 CDS2O95674 445 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 UCP1P25874 307 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 SP6Q3SY56 376 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 ZNF818PQ6ZRF7 136 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 LYZL2Q7Z4W2 148 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 HSD17B13Q7Z5P4 300 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 TBC1D26Q86UD7 250 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 COMMD7Q86VX2 200 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 CMTM1Q8IZ96 169 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 LHFPL5Q8TAF8 219 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 SECTM1Q8WVN6 248 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 TP53RKQ96S44 253 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 AIFM2Q9BRQ8 373 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 ZNF471Q9BX82 626 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 GSKIPQ9P0R6 139 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 RABAC1Q9UI14 185 aa9.15□□□□□ -0.94
CHRNA1-203ENST00000409219 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 TAAR5O14804 337 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 RBFOX2O43251 390 aaKnown RBP eCLIP9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 TPT1P13693 172 aaKnown RBP9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 NQO2P16083 231 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 S100GP29377 79 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 SMCO1Q147U7 214 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 FAM210BQ96KR6 192 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 PLEKHA2Q9HB19 425 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 CYTL1Q9NRR1 136 aa9.15□□□□□ -0.95
CHRNA1-203ENST00000409219 TEX50A0A1B0GTY4 177 aa9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 S100A10P60903 97 aa9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 RPL11P62913 178 aaKnown RBP9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 SLC35G3Q8N808 338 aa9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 LSM10Q969L4 123 aaKnown RBP9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 GINS3Q9BRX5 216 aa9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 CCL28Q9NRJ3 127 aa9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 NDUFA4L2Q9NRX3 87 aa9.14□□□□□ -0.95
CHRNA1-203ENST00000409219 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 E5RGE8 158 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 K7EPK0 472 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 K7EQG2 157 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 HPRT1P00492 218 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 MBPP02686 304 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 ZNF688P0C7X2 276 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 F2RP25116 425 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 EIF5AP63241 154 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 TMEM268Q5VZI3 342 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 SPATA12Q7Z6I5 190 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 BAP18Q8IXM2 172 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 SELENOHQ8IZQ5 122 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 C6orf223Q8N319 242 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 EIF4E3Q8N5X7 224 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 DMBX1Q8NFW5 382 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 OR4D5Q8NGN0 318 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 OR1L8Q8NGR8 309 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 LRRC20Q8TCA0 184 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 GRAMD2BQ96HH9 432 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 HINT2Q9BX68 163 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 NSG2Q9Y328 171 aa9.13□□□□□ -0.95
CHRNA1-203ENST00000409219 I3L2K1 104 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 INAFM2P0DMQ5 153 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 RPL12P30050 165 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 MSMO1Q15800 293 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 NMSQ5H8A3 153 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 TOR2AQ5JU69 321 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 TOMM20LQ6UXN7 152 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 RBPMSQ93062 196 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 C11orf1Q9H5F2 150 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 PFDN2Q9UHV9 154 aa9.12□□□□□ -0.95
CHRNA1-203ENST00000409219 SPART-AS1P0CW21 52 aa9.11□□□□□ -0.95
CHRNA1-203ENST00000409219 SLC25A6P12236 298 aa9.11□□□□□ -0.95
CHRNA1-203ENST00000409219 P2RY1P47900 373 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms