RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 RABAC1Q9UI14 185 aa9.38□□□□□ -0.91
LINC00339-201ENST00000404210 U3KQE9 123 aa9.38□□□□□ -0.91
LINC00339-201ENST00000404210 IGHV3OR16-8A0A075B7F1 116 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 IGHV7-4-1A0A0J9YVY3 117 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 A0A1W2PS18 150 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 C2orf70A6NJV1 201 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 SPP1P10451 314 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 CBLN1P23435 193 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 PATE2Q6UY27 113 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 IL34Q6ZMJ4 242 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 OR1B1Q8NGR6 318 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 GATAD1Q8WUU5 269 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 PFDN5Q99471 154 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 SMPXQ9UHP9 88 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 RFNGQ9Y644 331 aa9.37□□□□□ -0.91
LINC00339-201ENST00000404210 WNK1Q9H4A3 2382 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 ZNF207O43670 478 aaKnown RBP9.36□□□□□ -0.91
LINC00339-201ENST00000404210 MBP02144 154 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 OR5G3P0C626 314 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 FOLR2P14207 255 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 CD33P20138 364 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
LINC00339-201ENST00000404210 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
LINC00339-201ENST00000404210 RNF2Q99496 336 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 MCRIP2Q9BUT9 160 aaKnown RBP9.36□□□□□ -0.91
LINC00339-201ENST00000404210 SLC25A32Q9H2D1 315 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
LINC00339-201ENST00000404210 CHEK1O14757 476 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 BUB3O43684 328 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 COX7A2P2O60397 106 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 M6PRP20645 277 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 BMI1P35226 326 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 INSL3P51460 131 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
LINC00339-201ENST00000404210 ADAMTSL5Q6ZMM2 481 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 ST8SIA2Q92186 375 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 SLC25A39Q9BZJ4 359 aaPredicted RBP9.35□□□□□ -0.91
LINC00339-201ENST00000404210 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 DOK5Q9P104 306 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
LINC00339-201ENST00000404210 TENM1Q9UKZ4 2725 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 ZNF98A6NK75 572 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 H3BRN7 92 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 APOHP02749 345 aaPredicted RBP9.34□□□□□ -0.91
LINC00339-201ENST00000404210 PRR31Q5SQ13 230 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 C1orf194Q5T5A4 169 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 C9orf66Q5T8R8 295 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 C16orf54Q6UWD8 224 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 LINC00305Q7Z4B0 112 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 RHPN1-AS1Q9BWJ2 59 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 TMEM231Q9H6L2 316 aa9.34□□□□□ -0.91
LINC00339-201ENST00000404210 TECRQ9NZ01 308 aaKnown RBP9.34□□□□□ -0.91
LINC00339-201ENST00000404210 SEC14L6B5MCN3 397 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 CD5P06127 495 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 EDN2P20800 178 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 RHOBP62745 196 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 DEFB114Q30KQ6 69 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 GCSAMLQ5JQS6 135 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 FAM78BQ5VT40 261 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
LINC00339-201ENST00000404210 MRPL32Q9BYC8 188 aaKnown RBP9.33□□□□□ -0.92
LINC00339-201ENST00000404210 STAB1Q9NY15 2570 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 IGHV3-49A0A0A0MS15 119 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 A0A1W2PPV4 95 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 UMAD1C9J7I0 102 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 SAP30O75446 220 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 TMEM41BQ5BJD5 291 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 AKR1C8PQ5T2L2 129 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 PHYHIPLQ96FC7 376 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 GPR82Q96P67 336 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 GPR61Q9BZJ8 451 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 SEPSECSQ9HD40 501 aaKnown RBP9.32□□□□□ -0.92
LINC00339-201ENST00000404210 RPRMQ9NS64 109 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 MLXQ9UH92 298 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
LINC00339-201ENST00000404210 IGHV3OR16-13A0A075B7E8 117 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 IGHV3-74A0A0B4J1X5 117 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 IGHV3-66A0A0C4DH42 116 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 IGLV1-51P01701 117 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 RAB2AP61019 212 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 FAM90A2PQ658T7 463 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 OR8I2Q8N0Y5 310 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 RPP25LQ8N5L8 163 aaKnown RBP9.31□□□□□ -0.92
LINC00339-201ENST00000404210 OR2K2Q8NGT1 345 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 DYNLRB2Q8TF09 96 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
LINC00339-201ENST00000404210 GLMPQ8WWB7 406 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms