RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 STPG3Q8N7X2 389 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 OR1B1Q8NGR6 318 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 TMEM231Q9H6L2 316 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 ZMAT5Q9UDW3 170 aaKnown RBP22.12■■□□□ 1.13
USP42-202ENST00000404008 MIC13Q5XKP0 118 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 TMEM61Q8N0U2 210 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 PARD6GQ9BYG4 376 aaPredicted RBP22.12■■□□□ 1.13
USP42-202ENST00000404008 MFFQ9GZY8 342 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 ARL6Q9H0F7 186 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 MEGF8Q7Z7M0 2845 aa22.11■■□□□ 1.13
USP42-202ENST00000404008 PXDC1Q5TGL8 231 aa22.11■■□□□ 1.13
USP42-202ENST00000404008 NEURL2Q9BR09 285 aa22.11■■□□□ 1.13
USP42-202ENST00000404008 DOK5Q9P104 306 aa22.11■■□□□ 1.13
USP42-202ENST00000404008 BUB3O43684 328 aa22.1■■□□□ 1.13
USP42-202ENST00000404008 HYPMO75409 117 aa22.1■■□□□ 1.13
USP42-202ENST00000404008 SCGB1C1Q8TD33 95 aa22.1■■□□□ 1.13
USP42-202ENST00000404008 GRAMD2BQ96HH9 432 aa22.1■■□□□ 1.13
USP42-202ENST00000404008 PFDN2Q9UHV9 154 aa22.1■■□□□ 1.13
USP42-202ENST00000404008 PXMP4Q9Y6I8 212 aa22.1■■□□□ 1.13
USP42-202ENST00000404008 ZNF266Q14584 549 aa22.09■■□□□ 1.13
USP42-202ENST00000404008 ZNF345Q14585 488 aa22.09■■□□□ 1.13
USP42-202ENST00000404008 FAM90A2PQ658T7 463 aa22.09■■□□□ 1.13
USP42-202ENST00000404008 C16orf54Q6UWD8 224 aa22.09■■□□□ 1.13
USP42-202ENST00000404008 SLC39A9Q9NUM3 307 aa22.09■■□□□ 1.13
USP42-202ENST00000404008 ZNF256Q9Y2P7 627 aaPredicted RBP22.09■■□□□ 1.13
USP42-202ENST00000404008 TRAV25A0A0B4J276 109 aa22.08■■□□□ 1.12
USP42-202ENST00000404008 B2MP61769 119 aa22.08■■□□□ 1.12
USP42-202ENST00000404008 CD300CQ08708 224 aa22.08■■□□□ 1.12
USP42-202ENST00000404008 LAMTOR1Q6IAA8 161 aa22.08■■□□□ 1.12
USP42-202ENST00000404008 RBPMS2Q6ZRY4 209 aaKnown RBP22.08■■□□□ 1.12
USP42-202ENST00000404008 ZNF709Q8N972 641 aa22.08■■□□□ 1.12
USP42-202ENST00000404008 HIGD1AQ9Y241 93 aa22.08■■□□□ 1.12
USP42-202ENST00000404008 C1QBP02746 253 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 OR5G3P0C626 314 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 PATE2Q6UY27 113 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 Q6ZRG5 221 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 TCF24Q7RTU0 167 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 GLMPQ8WWB7 406 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 PPP1R14BQ96C90 147 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 RSG1Q9BU20 258 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 KCNIP2Q9NS61 270 aa22.07■■□□□ 1.12
USP42-202ENST00000404008 FBN3Q75N90 2809 aa22.06■■□□□ 1.12
USP42-202ENST00000404008 SORL1Q92673 2214 aa22.06■■□□□ 1.12
USP42-202ENST00000404008 ZNF785A8K8V0 405 aa22.06■■□□□ 1.12
USP42-202ENST00000404008 C17orf112F2Z3M2 114 aa22.06■■□□□ 1.12
USP42-202ENST00000404008 TSPAN4O14817 238 aa22.06■■□□□ 1.12
USP42-202ENST00000404008 CD5P06127 495 aa22.06■■□□□ 1.12
USP42-202ENST00000404008 KCNRGQ8N5I3 272 aa22.06■■□□□ 1.12
USP42-202ENST00000404008 GP9P14770 177 aa22.05■■□□□ 1.12
USP42-202ENST00000404008 TMEM37Q8WXS4 190 aa22.05■■□□□ 1.12
USP42-202ENST00000404008 SLC25A39Q9BZJ4 359 aaPredicted RBP22.05■■□□□ 1.12
USP42-202ENST00000404008 ARV1Q9H2C2 271 aa22.05■■□□□ 1.12
USP42-202ENST00000404008 COX7A2P2O60397 106 aa22.04■■□□□ 1.12
USP42-202ENST00000404008 CXCL2P19875 107 aa22.04■■□□□ 1.12
USP42-202ENST00000404008 S100A7P31151 101 aa22.04■■□□□ 1.12
USP42-202ENST00000404008 C1orf194Q5T5A4 169 aa22.04■■□□□ 1.12
USP42-202ENST00000404008 UHRF2Q96PU4 802 aa22.04■■□□□ 1.12
USP42-202ENST00000404008 ELOA3CA0A087WX78 387 aaPredicted RBP22.03■■□□□ 1.12
USP42-202ENST00000404008 ZNF98A6NK75 572 aa22.03■■□□□ 1.12
USP42-202ENST00000404008 H3BRN7 92 aa22.03■■□□□ 1.12
USP42-202ENST00000404008 TAAR5O14804 337 aa22.03■■□□□ 1.12
USP42-202ENST00000404008 GUCA2BQ16661 112 aa22.03■■□□□ 1.12
USP42-202ENST00000404008 RPL7L1Q6DKI1 246 aaKnown RBP22.03■■□□□ 1.12
USP42-202ENST00000404008 OR1L4Q8NGR5 311 aa22.03■■□□□ 1.12
USP42-202ENST00000404008 PRR25Q96S07 402 aa22.03■■□□□ 1.12
USP42-202ENST00000404008 SHANK2-AS3Q9BTD1 123 aa22.03■■□□□ 1.12
USP42-202ENST00000404008 A0A0D9SG52 128 aa22.02■■□□□ 1.12
USP42-202ENST00000404008 C10orf113Q5VZT2 155 aa22.02■■□□□ 1.12
USP42-202ENST00000404008 S100A7AQ86SG5 101 aa22.02■■□□□ 1.12
USP42-202ENST00000404008 PFDN5Q99471 154 aa22.02■■□□□ 1.12
USP42-202ENST00000404008 SPAG8Q99932 426 aaPredicted RBP22.02■■□□□ 1.12
USP42-202ENST00000404008 SCRT1Q9BWW7 348 aa22.02■■□□□ 1.12
USP42-202ENST00000404008 DNAJC4Q9NNZ3 241 aa22.02■■□□□ 1.12
USP42-202ENST00000404008 HELTA6NFD8 242 aa22.01■■□□□ 1.11
USP42-202ENST00000404008 PRB2P02812 416 aaPredicted RBP22.01■■□□□ 1.11
USP42-202ENST00000404008 LINC00305Q7Z4B0 112 aa22.01■■□□□ 1.11
USP42-202ENST00000404008 AURKAIP1Q9NWT8 199 aaPredicted RBP22.01■■□□□ 1.11
USP42-202ENST00000404008 TIMM9Q9Y5J7 89 aa22.01■■□□□ 1.11
USP42-202ENST00000404008 BORCS7-ASMTA0A0B4J1R7 106 aa22■■□□□ 1.11
USP42-202ENST00000404008 RPL11P62913 178 aaKnown RBP22■■□□□ 1.11
USP42-202ENST00000404008 LEMD1Q68G75 181 aa22■■□□□ 1.11
USP42-202ENST00000404008 SIGLEC15Q6ZMC9 328 aa22■■□□□ 1.11
USP42-202ENST00000404008 HSD17B11Q8NBQ5 300 aa22■■□□□ 1.11
USP42-202ENST00000404008 HYLS1Q96M11 299 aa22■■□□□ 1.11
USP42-202ENST00000404008 ARPC5LQ9BPX5 153 aa22■■□□□ 1.11
USP42-202ENST00000404008 SLC25A22Q9H936 323 aa22■■□□□ 1.11
USP42-202ENST00000404008 CYTL1Q9NRR1 136 aa22■■□□□ 1.11
USP42-202ENST00000404008 RFNGQ9Y644 331 aa22■■□□□ 1.11
USP42-202ENST00000404008 IGKV3-7A0A075B6H7 116 aa21.99■■□□□ 1.11
USP42-202ENST00000404008 GCSAMLQ5JQS6 135 aa21.99■■□□□ 1.11
USP42-202ENST00000404008 OR8I2Q8N0Y5 310 aa21.99■■□□□ 1.11
USP42-202ENST00000404008 MS4A6AQ9H2W1 248 aa21.99■■□□□ 1.11
USP42-202ENST00000404008 JTBO76095 146 aa21.99■■□□□ 1.11
USP42-202ENST00000404008 GATAD1Q8WUU5 269 aa21.99■■□□□ 1.11
USP42-202ENST00000404008 SLC25A32Q9H2D1 315 aa21.99■■□□□ 1.11
USP42-202ENST00000404008 FFAR4Q5NUL3 377 aa21.98■■□□□ 1.11
USP42-202ENST00000404008 GBGT1Q8N5D6 347 aa21.98■■□□□ 1.11
USP42-202ENST00000404008 ATP6V0CP27449 155 aa21.97■■□□□ 1.11
USP42-202ENST00000404008 PAFAH1B2P68402 229 aa21.97■■□□□ 1.11
USP42-202ENST00000404008 ZFP69Q49AA0 526 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms