RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 FGF7P21781 194 aa12.87□□□□□ -0.35
PTCHD3P3-201ENST00000403073 RAB31Q13636 194 aa12.87□□□□□ -0.35
PTCHD3P3-201ENST00000403073 ZNF546Q86UE3 836 aa12.87□□□□□ -0.35
PTCHD3P3-201ENST00000403073 WFDC3Q8IUB2 231 aa12.87□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
PTCHD3P3-201ENST00000403073 NEURL2Q9BR09 285 aa12.87□□□□□ -0.35
PTCHD3P3-201ENST00000403073 G3V3Q6 166 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 SMLR1H3BR10 107 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 HYPMO75409 117 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 CD5P06127 495 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 OR5G3P0C626 314 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PLP1P60201 277 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 MIC13Q5XKP0 118 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PATE2Q6UY27 113 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 GLMPQ8WWB7 406 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 ARL6Q9H0F7 186 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 MS4A6AQ9H2W1 248 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 WFDC1Q9HC57 220 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
PTCHD3P3-201ENST00000403073 FXYD6-FXYD2A0A087WZ82 144 aa12.85□□□□□ -0.35
PTCHD3P3-201ENST00000403073 ATP5SQ99766 215 aa12.85□□□□□ -0.35
PTCHD3P3-201ENST00000403073 SMAD5-AS1Q9Y6J3 95 aa12.85□□□□□ -0.35
PTCHD3P3-201ENST00000403073 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 DNASE2O00115 360 aaPredicted RBP12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 NUP62P37198 522 aaPredicted RBP12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PAFAH1B2P68402 229 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PRR20EP86478 221 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PRR20CP86479 221 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PRR20DP86480 221 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PRR20BP86481 221 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 PRR20AP86496 221 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 OPCMLQ14982 345 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 STXBP6Q8NFX7 210 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 AQP10Q96PS8 301 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 WFDC10AQ9H1F0 79 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 UBQLN2Q9UHD9 624 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 HIGD1AQ9Y241 93 aa12.84□□□□□ -0.35
PTCHD3P3-201ENST00000403073 HELTA6NFD8 242 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ZNF98A6NK75 572 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 MPDU1O75352 247 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 IGHV4-30-4P0DP06 118 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 RPL29P47914 159 aaKnown RBP12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 C1orf194Q5T5A4 169 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 LEMD1Q68G75 181 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SIGLEC15Q6ZMC9 328 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 DEFB125Q8N687 156 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 UHRF2Q96PU4 802 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SCRT1Q9BWW7 348 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 NPCDR1Q9BY65 106 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SLC25A39Q9BZJ4 359 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SLC39A9Q9NUM3 307 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 C19orf73Q9NVV2 129 aa12.83□□□□□ -0.36
PTCHD3P3-201ENST00000403073 hCG_2014768A0A024R1R8 64 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 AP2S1P53680 142 aaPredicted RBP12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 Q6ZRG5 221 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 OR8I2Q8N0Y5 310 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 TMEM37Q8WXS4 190 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SHANK2-AS3Q9BTD1 123 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 FBXL17Q9UF56 701 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 TNFSF18Q9UNG2 199 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 PXMP4Q9Y6I8 212 aa12.82□□□□□ -0.36
PTCHD3P3-201ENST00000403073 RNF222A6NCQ9 220 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 H3BRN7 92 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 COX7A2P2O60397 106 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 IFNA5P01569 189 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 B2MP61769 119 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 FAM24BQ8N5W8 94 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SCGB1C1Q8TD33 95 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SLC25A32Q9H2D1 315 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 DNAJC4Q9NNZ3 241 aa12.81□□□□□ -0.36
PTCHD3P3-201ENST00000403073 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
PTCHD3P3-201ENST00000403073 K7EQG2 157 aa12.8□□□□□ -0.36
PTCHD3P3-201ENST00000403073 S100A7P31151 101 aa12.8□□□□□ -0.36
PTCHD3P3-201ENST00000403073 C10orf113Q5VZT2 155 aa12.8□□□□□ -0.36
PTCHD3P3-201ENST00000403073 LINC00305Q7Z4B0 112 aa12.8□□□□□ -0.36
PTCHD3P3-201ENST00000403073 DCANP1Q8TF63 244 aa12.8□□□□□ -0.36
PTCHD3P3-201ENST00000403073 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ARPC5O15511 151 aa12.79□□□□□ -0.36
PTCHD3P3-201ENST00000403073 FRMD6-AS1P0C7T7 363 aa12.79□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ZNF709Q8N972 641 aa12.79□□□□□ -0.36
PTCHD3P3-201ENST00000403073 RSG1Q9BU20 258 aa12.79□□□□□ -0.36
PTCHD3P3-201ENST00000403073 NRN1Q9NPD7 142 aa12.79□□□□□ -0.36
PTCHD3P3-201ENST00000403073 RFNGQ9Y644 331 aa12.79□□□□□ -0.36
PTCHD3P3-201ENST00000403073 A8MZ25 164 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 C17orf112F2Z3M2 114 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ZNF124Q15973 351 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 MORN5Q5VZ52 161 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 S100A7AQ86SG5 101 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 APRG1Q8IVJ8 170 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 OR11H4Q8NGC9 324 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms