RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 OPCMLQ14982 345 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 KRTAP21-3Q3LHN1 58 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 PXDC1Q5TGL8 231 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 C10orf113Q5VZT2 155 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 EIF5AL1Q6IS14 154 aaKnown RBP6.84□□□□□ -1.31
BRCC3-206ENST00000399042 UNQ9165/PRO28630Q6UXU0 137 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 OR2G3Q8NGZ4 309 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 SPATA3Q8NHX4 192 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 TMEM190Q8WZ59 177 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 RCC1LQ96I51 464 aaKnown RBP6.84□□□□□ -1.31
BRCC3-206ENST00000399042 RSG1Q9BU20 258 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 MCRIP2Q9BUT9 160 aaKnown RBP6.84□□□□□ -1.31
BRCC3-206ENST00000399042 GGTLC1Q9BX51 225 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 SLC39A9Q9NUM3 307 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 SLC45A2Q9UMX9 530 aa6.84□□□□□ -1.31
BRCC3-206ENST00000399042 LSM4Q9Y4Z0 139 aaKnown RBP6.84□□□□□ -1.31
BRCC3-206ENST00000399042 IGHV3-66A0A0C4DH42 116 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 LGALS9O00182 355 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 MBP02144 154 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 ATP6V0CP27449 155 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 FHL3Q13643 280 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 ACOT6Q3I5F7 207 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-206ENST00000399042 AKR1C8PQ5T2L2 129 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 REC114Q7Z4M0 266 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 SLC51BQ86UW2 128 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 C9orf62Q8N4C0 152 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 PFDN5Q99471 154 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 PARD6GQ9BYG4 376 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-206ENST00000399042 SLC25A32Q9H2D1 315 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 DNAJC4Q9NNZ3 241 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 RNF24Q9Y225 148 aa6.83□□□□□ -1.32
BRCC3-206ENST00000399042 WNK1Q9H4A3 2382 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 IGHV7-4-1A0A0J9YVY3 117 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 K7EMT4 169 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 FOLR2P14207 255 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 USF2Q15853 346 aaPredicted RBP6.82□□□□□ -1.32
BRCC3-206ENST00000399042 LAMTOR1Q6IAA8 161 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 TMEM182Q6ZP80 229 aaPredicted RBP6.82□□□□□ -1.32
BRCC3-206ENST00000399042 RBPMS2Q6ZRY4 209 aaKnown RBP6.82□□□□□ -1.32
BRCC3-206ENST00000399042 LINC00305Q7Z4B0 112 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 BAP18Q8IXM2 172 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 OR8I2Q8N0Y5 310 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 LINC00482Q8N8I6 264 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 RHPN1-AS1Q9BWJ2 59 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 GPR61Q9BZJ8 451 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 ARV1Q9H2C2 271 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 MRPL27Q9P0M9 148 aaKnown RBP6.82□□□□□ -1.32
BRCC3-206ENST00000399042 TIMM9Q9Y5J7 89 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 STAB1Q9NY15 2570 aa6.82□□□□□ -1.32
BRCC3-206ENST00000399042 IGKV3-7A0A075B6H7 116 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 WI2-2373I1.2A0A1W2PRP0 233 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 C2orf70A6NJV1 201 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 CBLN1P23435 193 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 RHOBP62745 196 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 PAFAH1B2P68402 229 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 SERF2P84101 59 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 PRR31Q5SQ13 230 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 C9orf66Q5T8R8 295 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 FAM78BQ5VT40 261 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 OR10G4Q8NGN3 311 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 OR10G9Q8NGN4 311 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 OR10G7Q8NGN6 311 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 LRRC20Q8TCA0 184 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 RNF2Q99496 336 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 PSMG3Q9BT73 122 aaPredicted RBP6.81□□□□□ -1.32
BRCC3-206ENST00000399042 SH3BGRL3Q9H299 93 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 CYTL1Q9NRR1 136 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 SMPXQ9UHP9 88 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 SELENOKQ9Y6D0 94 aa6.81□□□□□ -1.32
BRCC3-206ENST00000399042 TENM1Q9UKZ4 2725 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 TMEM213A2RRL7 107 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 HELTA6NFD8 242 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 ZNF785A8K8V0 405 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 A8MWP6 167 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 DNASE2O00115 360 aaPredicted RBP6.8□□□□□ -1.32
BRCC3-206ENST00000399042 IGLL1P15814 213 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 ATF4P18848 351 aaPredicted RBP6.8□□□□□ -1.32
BRCC3-206ENST00000399042 M6PRP20645 277 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 CRYBB3P26998 211 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 GALR1P47211 349 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 TAS2R45P59539 299 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 GUCA2BQ16661 112 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 TMEM41BQ5BJD5 291 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 GCSAMLQ5JQS6 135 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 LEMD1Q68G75 181 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 FAM122CQ6P4D5 195 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 IQCF2Q8IXL9 164 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 GATAD1Q8WUU5 269 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 TMED6Q8WW62 240 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 ST8SIA2Q92186 375 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 UHRF2Q96PU4 802 aa6.8□□□□□ -1.32
BRCC3-206ENST00000399042 SLC25A39Q9BZJ4 359 aaPredicted RBP6.8□□□□□ -1.32
BRCC3-206ENST00000399042 ACTR3CQ9C0K3 210 aaPredicted RBP6.8□□□□□ -1.32
BRCC3-206ENST00000399042 TECRQ9NZ01 308 aaKnown RBP6.8□□□□□ -1.32
BRCC3-206ENST00000399042 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
BRCC3-206ENST00000399042 CHEK1O14757 476 aa6.79□□□□□ -1.32
BRCC3-206ENST00000399042 APOHP02749 345 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms