RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 GATA4P43694 442 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 RPL11P62913 178 aaKnown RBP7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 RTL8BQ17RB0 113 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 RUSC1-AS1Q66K80 236 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 PRNTQ86SH4 94 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 F11RQ9Y624 299 aaKnown RBP7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 ENSAO43768 121 aaKnown RBP7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 APOHP02749 345 aaPredicted RBP7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 KIR2DS2P43631 304 aa7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 BPIFB3P59826 476 aa7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 NHLH1Q02575 133 aa7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 INO80CQ6PI98 192 aaPredicted RBP7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 ZCCHC24Q8N2G6 241 aaKnown RBP7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 PRSS3P2Q8NHM4 247 aa7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 RPP21Q9H633 154 aaKnown RBP7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 ZNF257Q9Y2Q1 563 aa7.96□□□□□ -1.13
PTCHD4-202ENST00000398738 CSMD1Q96PZ7 3565 aa7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 A8MWL6 223 aa7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 M0R1B8 84 aa7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 HLA-DRB1P01911 266 aa7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 ACP1P24666 158 aa7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 RHOGP84095 191 aa7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 KLF5Q13887 457 aaPredicted RBP7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 DIAPH2-AS1Q14236 149 aa7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 MRPL20Q9BYC9 149 aaKnown RBP7.96□□□□□ -1.14
PTCHD4-202ENST00000398738 PPBPP02775 128 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 OR5AL1P0C617 328 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 FAM106CPP0CH98 169 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 FAM106AQ4KMX7 169 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 PEF1Q9UBV8 284 aaKnown RBP7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 PCSK5Q92824 1860 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 KBTBD11-OT1A0A1B0GTJ5 212 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 SRRM5B3KS81 715 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 NBEAP1P0C6P0 100 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 FXYD5Q96DB9 178 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 GPR82Q96P67 336 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 C19orf73Q9NVV2 129 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 CACNA1HO95180 2353 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 TMEM238C9JI98 176 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 OR2J3O76001 311 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 LIPFP07098 398 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 CCL3L1P16619 93 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 EXOC3-AS1Q8N2X6 119 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 WIPF2Q8TF74 440 aaPredicted RBP7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 SRSF12Q8WXF0 261 aaKnown RBP7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 SCRT2Q9NQ03 307 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 THYN1Q9P016 225 aa7.95□□□□□ -1.14
PTCHD4-202ENST00000398738 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 F2RL2O00254 374 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 ZNF207O43670 478 aaKnown RBP7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 CD5LO43866 347 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 NMUP48645 174 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 DLX1P56177 255 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 WT1-ASQ06250 92 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 GUSBP1Q15486 140 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 Q6ZT83 130 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 GOLT1AQ6ZVE7 132 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 FA2HQ7L5A8 372 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 MED13LQ71F56 2210 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 IGHV1-18A0A0C4DH31 117 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 K7EMI3 77 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 HIST1H1AQ02539 215 aaPredicted RBP7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 C2orf83Q53S99 150 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 TMEM97Q5BJF2 176 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 FER1L6-AS1Q8NA97 138 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 ZNF430Q9H8G1 570 aaPredicted RBP7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 MGAQ8IWI9 3026 aa7.94□□□□□ -1.14
PTCHD4-202ENST00000398738 SLC25A17O43808 307 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 CCL11P51671 97 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 C9orf106Q8NAJ2 232 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 OR1L4Q8NGR5 311 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 OR1L8Q8NGR8 309 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 H1FXQ92522 213 aaKnown RBP7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 DSCAMO60469 2012 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 A0A1B0GXF2 115 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 ARMS2P0C7Q2 107 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 LOXL1Q08397 574 aaPredicted RBP7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 FAM231DQ6ZW35 169 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 MRPL32Q9BYC8 188 aaKnown RBP7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 TNRC6BQ9UPQ9 1833 aaKnown RBP7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 A0A1W2PNU3 283 aaPredicted RBP7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 GNG7O60262 68 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 IGKV3-15P01624 115 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 LYZP61626 148 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 CCL8P80075 99 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 RASL11AQ6T310 242 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 RBPMS2Q6ZRY4 209 aaKnown RBP7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 C19orf24Q9BVV8 132 aa7.93□□□□□ -1.14
PTCHD4-202ENST00000398738 IGLC1P0CG04 106 aa7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 CFHR2P36980 270 aa7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 KIR2DL2P43627 348 aaPredicted RBP7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 OR1N2Q8NGR9 330 aa7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 Q9H3A6 140 aa7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 RABAC1Q9UI14 185 aa7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 IFI27P40305 119 aaPredicted RBP7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 FAM71F2Q6NXP2 309 aa7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 DHRS13Q6UX07 377 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms