RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 PLSCR4Q9NRQ2 329 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 C1RLQ9NZP8 487 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 INTS1Q8N201 2190 aaKnown RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 C15orf65H3BRN8 121 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 NPPCP23582 126 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF138P52744 262 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 WFDC12Q8WWY7 111 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 ICE1Q9Y2F5 2266 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 C15orf61A6NNL5 157 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 F2Z2F3 143 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 COX6CP09669 75 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 PSG3Q16557 428 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 WDR82Q6UXN9 313 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 RBPMS2Q6ZRY4 209 aaKnown RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 LHFPL4Q7Z7J7 247 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 SCNM1Q9BWG6 230 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 RPUSD1Q9UJJ7 312 aaKnown RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 CCL17Q92583 94 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 IFI27L2Q9H2X8 130 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 WNT9BO14905 357 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 FOXG1P55316 489 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-205ENST00000397611 LOXL3P58215 753 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 EFNB3Q15768 340 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 C11orf53Q8IXP5 236 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 ATP6V0BQ99437 205 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 GEMIN7Q9H840 131 aaKnown RBP4.47□□□□□ -1.69
PTPRD-205ENST00000397611 CGB1A6NKQ9 187 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 PRCDQ00LT1 54 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 WDR86Q86TI4 376 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF48Q96MX3 618 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-205ENST00000397611 DCTN5Q9BTE1 182 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 K7EP13 123 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 K7EP34 96 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 OR9G9P0C7N8 305 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 CX3CL1P78423 397 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 GTSCR1Q86UQ5 136 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 OR13A1Q8NGR1 328 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 FMC1Q96HJ9 113 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 RNF7Q9UBF6 113 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 DOCK10Q96BY6 2186 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 PRSS47A8MTI9 375 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 FSTL3O95633 263 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 IGHV4-39P01824 125 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 TFF1P04155 84 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 TNFRSF1AP19438 455 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 ADIPOQQ15848 244 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 LINC00311Q8N616 119 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 Q8TCH9 128 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 CCL13Q99616 98 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 CALYQ9NYX4 217 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 IGHV2-26A0A0B4J1V2 119 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 TRAV8-4A0A0B4J246 113 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 HOXA3O43365 443 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-205ENST00000397611 FCGR2BP31994 310 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-205ENST00000397611 TMEM95Q3KNT9 176 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 LCNL1Q6ZST4 164 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 OR9G4Q8NGQ1 327 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
PTPRD-205ENST00000397611 SEPSECSQ9HD40 501 aaKnown RBP4.47□□□□□ -1.69
PTPRD-205ENST00000397611 PINLYPA6NC86 204 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 HBDP02042 147 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 IGLL1P15814 213 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 AZU1P20160 251 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 ATP5L2Q7Z4Y8 100 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 TMEM14BQ9NUH8 114 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 IGHV2OR16-5A0A0B4J2B6 119 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 MBD3L4A6NDZ8 208 aaPredicted RBP4.46□□□□□ -1.69
PTPRD-205ENST00000397611 MBD3L3A6NE82 208 aaPredicted RBP4.46□□□□□ -1.69
PTPRD-205ENST00000397611 MBD3L5A6NJ08 208 aaPredicted RBP4.46□□□□□ -1.69
PTPRD-205ENST00000397611 PRSS8Q16651 343 aa4.46□□□□□ -1.69
PTPRD-205ENST00000397611 MBD3L2Q8NHZ7 208 aaPredicted RBP4.46□□□□□ -1.69
PTPRD-205ENST00000397611 NUPR1O60356 82 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 DLX6P56179 175 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 SS18L2Q9UHA2 77 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 TDRG1Q3Y452 100 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 OR4C13Q8NGP0 309 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 LGALS7P47929 136 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 MORN2Q502X0 79 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 C1orf122Q6ZSJ8 110 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 MED12LQ86YW9 2145 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 KIAA2026Q5HYC2 2103 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 IGKCP01834 107 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 PRSS2P07478 247 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 OR4A5Q8NH83 315 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 CITED1Q99966 193 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 VCX2Q9H322 139 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 IGLC7A0M8Q6 106 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 ZNF503-AS2A6NEH8 195 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 RPL27AP46776 148 aaKnown RBP4.46□□□□□ -1.7
PTPRD-205ENST00000397611 CD69Q07108 199 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 GAGE2EQ4V326 116 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 ORMDL3Q8N138 153 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 GPR82Q96P67 336 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 RCHY1Q96PM5 261 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 Q9H3A6 140 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms