RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 NDFIP1Q9BT67 221 aa10.68□□□□□ -0.7
TRIM40-207ENST00000396581 CLEC5AQ9NY25 188 aa10.68□□□□□ -0.7
TRIM40-207ENST00000396581 JKAMPQ9P055 326 aa10.68□□□□□ -0.7
TRIM40-207ENST00000396581 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 PGPA6NDG6 321 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 SLC25A5P05141 298 aaKnown RBP10.67□□□□□ -0.7
TRIM40-207ENST00000396581 PAX2Q02962 417 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 FBLN7Q53RD9 439 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 ANKRD39Q53RE8 183 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 C5orf17Q8NAS9 161 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 ST6GALNAC6Q969X2 333 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 TRGV9Q99603 122 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 NBASA2RRP1 2371 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 C22orf46C9J442 243 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 ZNF137PP52743 207 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 PLP1P60201 277 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
TRIM40-207ENST00000396581 RHOGP84095 191 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 MRGPRG-AS1Q2M3A8 158 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 ETFRF1Q6IPR1 90 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 C16orf54Q6UWD8 224 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 TMEM186Q96B77 213 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 VKORC1Q9BQB6 163 aa10.67□□□□□ -0.7
TRIM40-207ENST00000396581 TRAV30A0A087WSZ9 112 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 OVOL3O00110 214 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 NBEAP1P0C6P0 100 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 GP9P14770 177 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 CDKN1BP46527 198 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 C10orf55Q5SWW7 151 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
TRIM40-207ENST00000396581 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 OR10X1Q8NGY0 326 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 C22orf15Q8WYQ4 148 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 SH3BGRL2Q9UJC5 107 aa10.66□□□□□ -0.7
TRIM40-207ENST00000396581 A0A1W2PPI3 338 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 C16orf97H3BN30 126 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 FCN3O75636 299 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 HLA-DRB1P01911 266 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
TRIM40-207ENST00000396581 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.7
TRIM40-207ENST00000396581 PLCE1Q9P212 2302 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 LOC102724200A0A096LPH7 203 aaPredicted RBP10.65□□□□□ -0.7
TRIM40-207ENST00000396581 SH2D7A6NKC9 451 aaPredicted RBP10.65□□□□□ -0.7
TRIM40-207ENST00000396581 LEPROTL1O95214 131 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 P01737 135 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 TCRAP04437 139 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 PRORYQ9H606 182 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 WASHC3Q9Y3C0 194 aa10.65□□□□□ -0.7
TRIM40-207ENST00000396581 DYSFO75923 2080 aa10.65□□□□□ -0.71
TRIM40-207ENST00000396581 HAX1O00165 279 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 PLAUP00749 431 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 LIPFP07098 398 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 CCL3L1P16619 93 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 HOXB4P17483 251 aaPredicted RBP10.64□□□□□ -0.71
TRIM40-207ENST00000396581 C21orf62-AS1Q17RA5 79 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 RUSC1-AS1Q66K80 236 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 TMEM200BQ69YZ2 307 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 PET117Q6UWS5 81 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 LINC00173Q6ZV60 143 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 NUP37Q8NFH4 326 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 TRBV6-1A0A0K0K1D8 114 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 TAX1BP3O14907 124 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 IGHV3-48P01763 117 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 BVES-AS1Q5T3Y7 98 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 DEFB125Q8N687 156 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 GATD1Q8NB37 220 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 OR1B1Q8NGR6 318 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 BLNKQ8WV28 456 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 TMEM190Q8WZ59 177 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 TMEM191AQ9H0A3 160 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 MS4A6AQ9H2W1 248 aa10.64□□□□□ -0.71
TRIM40-207ENST00000396581 PKD1L2Q7Z442 2459 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 M0QZ24 198 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 TNFRSF13BO14836 293 aaPredicted RBP10.63□□□□□ -0.71
TRIM40-207ENST00000396581 ORM2P19652 201 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 DIAPH2-AS1Q14236 149 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 VMA21Q3ZAQ7 101 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 ALKBH2Q6NS38 261 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 SLC25A34Q6PIV7 304 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 C8orf46Q8TAG6 207 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 SGK494Q96LW2 274 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 Q9H3A6 140 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 ADGRG4Q8IZF6 3080 aa10.63□□□□□ -0.71
TRIM40-207ENST00000396581 hDV102S1A0JD36 115 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 CD40P25942 277 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 ITPR1Q14643 2758 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 IGLV2-11P01706 119 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 TNFRSF1AP19438 455 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 CD24P25063 80 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 MC5RP33032 325 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 LGALS7P47929 136 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 SAPCD1Q5SSQ6 148 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 Q86TA4 180 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 H1FXQ92522 213 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms