RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 OR10D4PQ8NGN7 298 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 IMMP2LQ96T52 175 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 MRPL32Q9BYC8 188 aaKnown RBP8.82□□□□□ -1
TCOF1-203ENST00000394269 HIGD1AQ9Y241 93 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 OR2T8A6NH00 312 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 FRMD6-AS1P0C7T7 363 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 PDLIM4P50479 330 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 BCL6BQ8N143 479 aaPredicted RBP8.81□□□□□ -1
TCOF1-203ENST00000394269 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 NIPBLQ6KC79 2804 aaeCLIP8.81□□□□□ -13e-7■■■■■ 27.8
TCOF1-203ENST00000394269 PSMB11A5LHX3 300 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 IGLC1P0CG04 106 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 LY6EQ16553 131 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 BAGE2Q86Y30 109 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 OR8I2Q8N0Y5 310 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 THAP8Q8NA92 274 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 SIRPDQ9H106 197 aa8.81□□□□□ -1
TCOF1-203ENST00000394269 I3L2K1 104 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 ISLRO14498 428 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 CNN1P51911 297 aaKnown RBP8.8□□□□□ -1
TCOF1-203ENST00000394269 UBE2G1P62253 170 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 EXOC3-AS1Q8N2X6 119 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 RNF2Q99496 336 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 TRGV9Q99603 122 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 SRD5A3Q9H8P0 318 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 IGHV3OR16-13A0A075B7E8 117 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 IGHV3-74A0A0B4J1X5 117 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 TRAV40A0A0B4J280 105 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 A0A1W2PRE2 83 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 XKRY2A2RUG3 117 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 LINC01548A6NM66 108 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
TCOF1-203ENST00000394269 K7EIM0 57 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 IGKV1-17P01599 117 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 CBLN1P23435 193 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 SSTP61278 116 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 C16orf54Q6UWD8 224 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 UNQ5815/PRO19632Q6UWF5 114 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 FXYD5Q96DB9 178 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 RNF5Q99942 180 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 GNB4Q9HAV0 340 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 ATRQ13535 2644 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 TRAV8-1A0A0A6YYK1 113 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 G3V318 75 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 CRYGCP07315 174 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 SMIM6P0DI80 62 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 BRS3P32247 399 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 IER3P46695 156 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 PYY3Q5JQD4 70 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 CLEC2AQ6UVW9 174 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 ZNF562Q6V9R5 426 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 ZNF843Q8N446 348 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 C17orf77Q96MU5 243 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 HSPB9Q9BQS6 159 aa8.8□□□□□ -1
TCOF1-203ENST00000394269 UNC79Q9P2D8 2635 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 A0A1B0GUS0 222 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 MRPL54Q6P161 138 aaKnown RBP8.79□□□□□ -1
TCOF1-203ENST00000394269 ZNF600Q6ZNG1 722 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 GAR1Q9NY12 217 aaKnown RBP8.79□□□□□ -1
TCOF1-203ENST00000394269 FLNAP21333 2647 aaKnown RBP8.79□□□□□ -1
TCOF1-203ENST00000394269 IGHV4-30-2A0A087WSY4 118 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 NDUFB8O95169 186 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 UBE2E1P51965 193 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 PIMREGQ9BSJ6 248 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 SLC25A39Q9BZJ4 359 aaPredicted RBP8.79□□□□□ -1
TCOF1-203ENST00000394269 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 PEX7O00628 323 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 HOXA5P20719 270 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 SRP14P37108 136 aaKnown RBP8.79□□□□□ -1
TCOF1-203ENST00000394269 IBA57Q5T440 356 aaKnown RBP8.79□□□□□ -1
TCOF1-203ENST00000394269 ZNF329Q86UD4 541 aa8.79□□□□□ -1
TCOF1-203ENST00000394269 CENPVL3A0A0U1RRI6 287 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 NPFFO15130 113 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 HIST1H1BP16401 226 aaKnown RBP8.78□□□□□ -1
TCOF1-203ENST00000394269 S100A12P80511 92 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 C1orf122Q6ZSJ8 110 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 NPBQ8NG41 125 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 CMTM2Q8TAZ6 248 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 FBXL7Q9UJT9 491 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 IGHV3-49A0A0A0MS15 119 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 IGHV3-66A0A0C4DH42 116 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 NDUFS6O75380 124 aaKnown RBP8.78□□□□□ -1
TCOF1-203ENST00000394269 CDX1P47902 265 aaPredicted RBP8.78□□□□□ -1
TCOF1-203ENST00000394269 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
TCOF1-203ENST00000394269 IGHV7-81A0A0B4J1V7 117 aa8.77□□□□□ -1
TCOF1-203ENST00000394269 MINOS1Q5TGZ0 78 aa8.77□□□□□ -1
TCOF1-203ENST00000394269 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1
TCOF1-203ENST00000394269 Q9H3A6 140 aa8.77□□□□□ -1
TCOF1-203ENST00000394269 C21orf62Q9NYP8 219 aa8.77□□□□□ -1
TCOF1-203ENST00000394269 C1RLQ9NZP8 487 aa8.77□□□□□ -1
TCOF1-203ENST00000394269 MINOS1-NBL1R4GNA1 71 aa8.77□□□□□ -1
TCOF1-203ENST00000394269 NDUFA3O95167 84 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 MFAP4P55083 255 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 RPEL1Q2QD12 228 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 LINC00469Q8N7U9 141 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 C11orf52Q96A22 123 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 RNF125Q96EQ8 232 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 EPDR1Q9UM22 224 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms