RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 MIR17HGQ75NE6 70 aa17.9■□□□□ 0.46
CNN3-202ENST00000394202 SFT2D1Q8WV19 159 aa17.9■□□□□ 0.46
CNN3-202ENST00000394202 HRH4Q9H3N8 390 aa17.9■□□□□ 0.46
CNN3-202ENST00000394202 FBN1P35555 2871 aaKnown RBP17.89■□□□□ 0.45
CNN3-202ENST00000394202 TMEM218A2RU14 115 aa17.89■□□□□ 0.45
CNN3-202ENST00000394202 HYPMO75409 117 aa17.89■□□□□ 0.45
CNN3-202ENST00000394202 LGALS1P09382 135 aaKnown RBP17.89■□□□□ 0.45
CNN3-202ENST00000394202 H2AFB1P0C5Y9 115 aa17.89■□□□□ 0.45
CNN3-202ENST00000394202 CDX1P47902 265 aaPredicted RBP17.89■□□□□ 0.45
CNN3-202ENST00000394202 FGF8P55075 233 aaPredicted RBP17.89■□□□□ 0.45
CNN3-202ENST00000394202 DEFB136Q30KP8 78 aa17.89■□□□□ 0.45
CNN3-202ENST00000394202 C10orf113Q5VZT2 155 aa17.89■□□□□ 0.45
CNN3-202ENST00000394202 IL34Q6ZMJ4 242 aa17.89■□□□□ 0.45
CNN3-202ENST00000394202 NARS2Q96I59 477 aaKnown RBP17.89■□□□□ 0.45
CNN3-202ENST00000394202 ACTR3CQ9C0K3 210 aaPredicted RBP17.89■□□□□ 0.45
CNN3-202ENST00000394202 ZFAND3Q9H8U3 227 aa17.89■□□□□ 0.45
CNN3-202ENST00000394202 ATF4P18848 351 aaPredicted RBP17.88■□□□□ 0.45
CNN3-202ENST00000394202 CDC34P49427 236 aaPredicted RBP17.88■□□□□ 0.45
CNN3-202ENST00000394202 BLOC1S1P78537 153 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 CCL20P78556 96 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 ATRAIDQ6UW56 229 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 CITED2Q99967 270 aaPredicted RBP17.88■□□□□ 0.45
CNN3-202ENST00000394202 MRPL27Q9P0M9 148 aaKnown RBP17.88■□□□□ 0.45
CNN3-202ENST00000394202 TRAV5A0A0B4J249 113 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 A0A1W2PPV4 95 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 SCGB2A1O75556 95 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 UNQ9165/PRO28630Q6UXU0 137 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 PRIMA1Q86XR5 153 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 GATAD1Q8WUU5 269 aa17.88■□□□□ 0.45
CNN3-202ENST00000394202 LEMD1Q68G75 181 aa17.87■□□□□ 0.45
CNN3-202ENST00000394202 LINC00305Q7Z4B0 112 aa17.87■□□□□ 0.45
CNN3-202ENST00000394202 LYPD6BQ8NI32 183 aa17.87■□□□□ 0.45
CNN3-202ENST00000394202 MBD3L1Q8WWY6 194 aa17.87■□□□□ 0.45
CNN3-202ENST00000394202 NKX6-2Q9C056 277 aaPredicted RBP17.87■□□□□ 0.45
CNN3-202ENST00000394202 CTXND1A0A1B0GTU2 59 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 RHOBP62745 196 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 OR1L4Q8NGR5 311 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 FUT9Q9Y231 359 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 IGHV4OR15-8A0A075B7B6 117 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 A0A087WW49 117 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 ELOA3CA0A087WX78 387 aaPredicted RBP17.86■□□□□ 0.45
CNN3-202ENST00000394202 A0A1W2PRX2 142 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 MAP1LC3B2A6NCE7 125 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 DNASE2O00115 360 aaPredicted RBP17.86■□□□□ 0.45
CNN3-202ENST00000394202 GGCTO75223 188 aaKnown RBP17.86■□□□□ 0.45
CNN3-202ENST00000394202 RELQ04864 619 aaPredicted RBP17.86■□□□□ 0.45
CNN3-202ENST00000394202 PFDN5Q99471 154 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 MAP1LC3BQ9GZQ8 125 aa17.86■□□□□ 0.45
CNN3-202ENST00000394202 ZNF207O43670 478 aaKnown RBP17.85■□□□□ 0.45
CNN3-202ENST00000394202 FAM209BQ5JX69 171 aa17.85■□□□□ 0.45
CNN3-202ENST00000394202 C10orf91Q5T1B1 145 aa17.85■□□□□ 0.45
CNN3-202ENST00000394202 KLHL30-AS1Q8NEE0 82 aa17.85■□□□□ 0.45
CNN3-202ENST00000394202 DUX3Q96PT4 197 aa17.85■□□□□ 0.45
CNN3-202ENST00000394202 C19orf24Q9BVV8 132 aa17.85■□□□□ 0.45
CNN3-202ENST00000394202 HIGD1AQ9Y241 93 aa17.85■□□□□ 0.45
CNN3-202ENST00000394202 SVBPQ8N300 66 aa17.84■□□□□ 0.45
CNN3-202ENST00000394202 C4orf3Q8WVX3 66 aa17.84■□□□□ 0.45
CNN3-202ENST00000394202 SLC25A39Q9BZJ4 359 aaPredicted RBP17.84■□□□□ 0.45
CNN3-202ENST00000394202 TMPRSS5Q9H3S3 457 aa17.84■□□□□ 0.45
CNN3-202ENST00000394202 C8orf86Q6ZUL3 223 aa17.84■□□□□ 0.45
CNN3-202ENST00000394202 FAM167A-AS1Q96KT0 104 aa17.84■□□□□ 0.45
CNN3-202ENST00000394202 C20orf24Q9BUV8 137 aa17.84■□□□□ 0.45
CNN3-202ENST00000394202 SCRT1Q9BWW7 348 aa17.84■□□□□ 0.45
CNN3-202ENST00000394202 SLC25A2Q9BXI2 301 aa17.83■□□□□ 0.44
CNN3-202ENST00000394202 CARHSP1Q9Y2V2 147 aaKnown RBP17.83■□□□□ 0.44
CNN3-202ENST00000394202 STAG3L2P0CL84 134 aa17.82■□□□□ 0.44
CNN3-202ENST00000394202 STAG3L3P0CL85 134 aa17.82■□□□□ 0.44
CNN3-202ENST00000394202 ARL14EPLP0DKL9 152 aa17.82■□□□□ 0.44
CNN3-202ENST00000394202 ZNF503Q96F45 646 aa17.82■□□□□ 0.44
CNN3-202ENST00000394202 TRAV1-1A0A0B4J248 108 aa17.82■□□□□ 0.44
CNN3-202ENST00000394202 NDUFA4O00483 81 aa17.82■□□□□ 0.44
CNN3-202ENST00000394202 HSPB1P04792 205 aaKnown RBP17.82■□□□□ 0.44
CNN3-202ENST00000394202 KRTAP24-1Q3LI83 254 aa17.82■□□□□ 0.44
CNN3-202ENST00000394202 ZNF320A2RRD8 509 aa17.81■□□□□ 0.44
CNN3-202ENST00000394202 APOHP02749 345 aaPredicted RBP17.81■□□□□ 0.44
CNN3-202ENST00000394202 OR11H1Q8NG94 326 aa17.81■□□□□ 0.44
CNN3-202ENST00000394202 TSSC4Q9Y5U2 329 aaPredicted RBP17.81■□□□□ 0.44
CNN3-202ENST00000394202 IGHV3-49A0A0A0MS15 119 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 C8orf88P0DMB2 117 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 HOXD3P31249 432 aaPredicted RBP17.8■□□□□ 0.44
CNN3-202ENST00000394202 RPEL1Q2QD12 228 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 SHANK2-AS3Q9BTD1 123 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 MRPL32Q9BYC8 188 aaKnown RBP17.8■□□□□ 0.44
CNN3-202ENST00000394202 IGHV3OR16-13A0A075B7E8 117 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 IGHV3-74A0A0B4J1X5 117 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 A0A1B0GUS0 222 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 ADARB2-AS1A8MUL3 147 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 H3BRN7 92 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 SNRPCP09234 159 aaKnown RBP17.8■□□□□ 0.44
CNN3-202ENST00000394202 GPHB5Q86YW7 130 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 WFDC12Q8WWY7 111 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 RNF2Q99496 336 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 SEC11CQ9BY50 192 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 RABAC1Q9UI14 185 aa17.8■□□□□ 0.44
CNN3-202ENST00000394202 F8W036 122 aa17.79■□□□□ 0.44
CNN3-202ENST00000394202 ADCYAP1P18509 176 aa17.79■□□□□ 0.44
CNN3-202ENST00000394202 EDN2P20800 178 aa17.79■□□□□ 0.44
CNN3-202ENST00000394202 FOXL1Q12952 345 aa17.79■□□□□ 0.44
CNN3-202ENST00000394202 TMEM190Q8WZ59 177 aa17.79■□□□□ 0.44
CNN3-202ENST00000394202 TECRQ9NZ01 308 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms