RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 UQCC1Q9NVA1 299 aa14.16□□□□□ -0.14
PDLIM7-204ENST00000393546 SLC45A2Q9UMX9 530 aa14.16□□□□□ -0.14
PDLIM7-204ENST00000393546 MPC2O95563 127 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 RAB31Q13636 194 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 OXA1LQ15070 435 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 ODF3L2Q3SX64 289 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 C1orf194Q5T5A4 169 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 OR1B1Q8NGR6 318 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 TMEM147Q9BVK8 224 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 FBXL17Q9UF56 701 aa14.15□□□□□ -0.14
PDLIM7-204ENST00000393546 CXCL3P19876 107 aa14.14□□□□□ -0.15
PDLIM7-204ENST00000393546 SIGLEC15Q6ZMC9 328 aa14.14□□□□□ -0.15
PDLIM7-204ENST00000393546 LINC00322Q6ZN03 302 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-204ENST00000393546 RNF126Q9BV68 326 aa14.14□□□□□ -0.15
PDLIM7-204ENST00000393546 RBMY1BA6NDE4 496 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 RBMY1EA6NEQ0 496 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 AGPAT2O15120 278 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 HYPMO75409 117 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 RBMY1DP0C7P1 496 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 LINC00869P0C866 280 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 NHLH2Q02577 135 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 FCN2Q15485 313 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 HAGHQ16775 308 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 VWC2Q2TAL6 325 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 S100A7AQ86SG5 101 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 ZNF546Q86UE3 836 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 STPG3Q8N7X2 389 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 ZMAT4Q9H898 229 aa14.13□□□□□ -0.15
PDLIM7-204ENST00000393546 K7EQG2 157 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 CAMLGP49069 296 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 PLP1P60201 277 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 RAP2BP61225 183 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 OR8I2Q8N0Y5 310 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 CITED4Q96RK1 184 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 MGST2Q99735 147 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 WDR83OSQ9Y284 106 aa14.12□□□□□ -0.15
PDLIM7-204ENST00000393546 LOC102724200A0A096LPH7 203 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 ZNF98A6NK75 572 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 OR5G3P0C626 314 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 BAXQ07812 192 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 PXDC1Q5TGL8 231 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 APRG1Q8IVJ8 170 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 OR11H7Q8NGC8 314 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 DCANP1Q8TF63 244 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 ARL6Q9H0F7 186 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 MAP6D1Q9H9H5 199 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 NRN1Q9NPD7 142 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 DOK5Q9P104 306 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 HIGD1AQ9Y241 93 aa14.11□□□□□ -0.15
PDLIM7-204ENST00000393546 UBE2L5PA0A1B0GUS4 154 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 DEFB131AP59861 70 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 OR5C1Q8NGR4 320 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 THAP6Q8TBB0 222 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 TM2D3Q9BRN9 247 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 GGTLC1Q9BX51 225 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 SLC25A22Q9H936 323 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 COL7A1Q02388 2944 aa14.1□□□□□ -0.15
PDLIM7-204ENST00000393546 FAM24BQ8N5W8 94 aa14.09□□□□□ -0.15
PDLIM7-204ENST00000393546 SLC25A39Q9BZJ4 359 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-204ENST00000393546 MBD2Q9UBB5 411 aa14.09□□□□□ -0.15
PDLIM7-204ENST00000393546 U3KQK5 164 aa14.09□□□□□ -0.15
PDLIM7-204ENST00000393546 ZNF688P0C7X2 276 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 FGF7P21781 194 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 RPL12P30050 165 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 GALR1P47211 349 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 Q6ZRG5 221 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 ASB13Q8WXK3 278 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 GPR82Q96P67 336 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 SPATA25Q9BR10 227 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 SHANK2-AS3Q9BTD1 123 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 SEPSECSQ9HD40 501 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 RNF24Q9Y225 148 aa14.08□□□□□ -0.16
PDLIM7-204ENST00000393546 H3BRN7 92 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 MPDU1O75352 247 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 LYL1P12980 280 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 RPL29P47914 159 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 SNRPD3P62318 126 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 FGL1Q08830 312 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 CLINT1Q14677 625 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 ZNF124Q15973 351 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 PATE2Q6UY27 113 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 CHAC2Q8WUX2 184 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 ARV1Q9H2C2 271 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 SLC25A32Q9H2D1 315 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 HSPB11Q9Y547 144 aa14.07□□□□□ -0.16
PDLIM7-204ENST00000393546 ELOA3CA0A087WX78 387 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 COX7A2P2O60397 106 aa14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 GIPP09681 153 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 APOC4P55056 127 aa14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 MIC13Q5XKP0 118 aa14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 LEMD1Q68G75 181 aa14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 RCHY1Q96PM5 261 aa14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 SCRT1Q9BWW7 348 aa14.06□□□□□ -0.16
PDLIM7-204ENST00000393546 RPL35AP18077 110 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 ID1P41134 155 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 MEOX2P50222 304 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 PRR20EP86478 221 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 PRR20CP86479 221 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 PRR20DP86480 221 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms