RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RAB40CQ96S21 281 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 TRGV9Q99603 122 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 C11orf1Q9H5F2 150 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 EDA2RQ9HAV5 297 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 SACSQ9NZJ4 4579 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 IGSF23A1L1A6 192 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 HELTA6NFD8 242 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 SNRPGP15A8MWD9 76 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 TSC22D2O75157 780 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 CST7O76096 145 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 ORM2P19652 201 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 CAV2P51636 162 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 DEFA1P59665 94 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 DEFA3P59666 94 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 LRRC37A5PQ49AS3 106 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 PSMG4Q5JS54 123 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 CYP2G1PQ6ZSU1 146 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 TMEM217Q8N7C4 229 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 OR10P1Q8NGE3 313 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 OR1B1Q8NGR6 318 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 OVOL2Q9BRP0 275 aa5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 GPN1Q9HCN4 374 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P1-201ENST00000393368 PLECQ15149 4684 aaKnown RBP5.65□□□□□ -1.51
HMGB3P1-201ENST00000393368 hCG_2014768A0A024R1R8 64 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 TRAV2A0A0B4J234 112 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 CD5P06127 495 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 FABP1P07148 127 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 PRB4P10163 310 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 APOC4P55056 127 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 TAS2R30P59541 319 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 DLK1P80370 383 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 IL15RAQ13261 267 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 TMEM144Q7Z5S9 345 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 BPIFCQ8NFQ6 507 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 MUC7Q8TAX7 377 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 LYSTQ99698 3801 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 MARVELD1Q9BSK0 173 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 SCRT1Q9BWW7 348 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 SLC25A32Q9H2D1 315 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 SLC25A22Q9H936 323 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 OR5AC2Q9NZP5 309 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 MGAT4CQ9UBM8 478 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 RYR2Q92736 4967 aa5.64□□□□□ -1.51
HMGB3P1-201ENST00000393368 UBE2L5PA0A1B0GUS4 154 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 ZNF98A6NK75 572 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 H0YIZ8 118 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 SPRY2O43597 315 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 SSNA1O43805 119 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 PRAF2O60831 178 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 CA1P00915 261 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 LINC00869P0C866 280 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 C4BPBP20851 252 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 H2BFSP57053 126 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 EWSR1Q01844 656 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 ACTL10Q5JWF8 245 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 IGFL4Q6B9Z1 124 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 STHQ8IWL8 128 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 OR8I2Q8N0Y5 310 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 C17orf77Q96MU5 243 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 UHRF2Q96PU4 802 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 MGST2Q99735 147 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 TMEM147Q9BVK8 224 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 ARL6Q9H0F7 186 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 NPVFQ9HCQ7 196 aa5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 LYRM2Q9NU23 88 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
HMGB3P1-201ENST00000393368 KIR2DL5BA0A0G2JN68 375 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 KIR2DL5BA0A0G2JPC4 375 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 A0A0J9YWU9 116 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 H3BRN7 92 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 SOCS3O14543 225 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 AGPAT2O15120 278 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 DEDDO75618 318 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 SNRPCP09234 159 aaKnown RBP5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 OR5G3P0C626 314 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 LYL1P12980 280 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 PVALBP20472 110 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 AP2S1P53680 142 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 CMC4P56277 68 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 CASC10Q5T4H9 136 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 GDF5OSQ5U4N7 250 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 TEPPQ6URK8 271 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 PATE2Q6UY27 113 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 TRPT1Q86TN4 253 aaKnown RBP5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 KIR2DL5AQ8N109 375 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 TMEM252Q8N6L7 170 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 KIR2DL5BQ8NHK3 375 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 LINC00052Q96N35 136 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 RSG1Q9BU20 258 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 SLC25A39Q9BZJ4 359 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 CSTL1Q9H114 145 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 CLEC5AQ9NY25 188 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 HIGD1AQ9Y241 93 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 ALG5Q9Y673 324 aa5.62□□□□□ -1.51
HMGB3P1-201ENST00000393368 FNDC10F2Z333 226 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 F6UB75 175 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 HYPMO75409 117 aa5.61□□□□□ -1.51
HMGB3P1-201ENST00000393368 CFDP00746 253 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms