RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 UQCRFS1P47985 274 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 SELENOTP62341 195 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 MMDQ15546 238 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 OR11H6Q8NGC7 330 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 IGF2BP2-AS1Q96M15 143 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 RNF2Q99496 336 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 FAM103A1Q9BTL3 118 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 DPM3Q9P2X0 92 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 CELSR1Q9NYQ6 3014 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 ZFP36P26651 326 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 COA6Q5JTJ3 125 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 ZNF329Q86UD4 541 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 DYNAPQ8N1N2 210 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 NEU4Q8WWR8 484 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 PKD1L2Q7Z442 2459 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 H3BTX0 84 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 CBLN1P23435 193 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 RANP62826 216 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 GNG5P63218 68 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 DTX2Q86UW9 622 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 BLNKQ8WV28 456 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 TRGV9Q99603 122 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 CITED1Q99966 193 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 PRORYQ9H606 182 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-204ENST00000380176 ODF3BA8MYP8 253 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 I3L2K1 104 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 SPINK4O60575 86 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 CNIH1O95406 144 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 GCGP01275 180 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 MGST1P10620 155 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 ADMP35318 185 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 ARL3P36405 182 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 PDLIM4P50479 330 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 CNN1P51911 297 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 OR8I2Q8N0Y5 310 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 C19orf84I3L1E1 186 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 NUPR1O60356 82 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 PRTN3P24158 256 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 DDTP30046 118 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 SLC35B1P78383 322 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 TIGITQ495A1 244 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 KLF17Q5JT82 389 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 NUDT11Q96G61 164 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 SGK494Q96LW2 274 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 PIMREGQ9BSJ6 248 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 M0R1W7 72 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 ISLRO14498 428 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 NBR2O15453 112 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 SCGB1D1O95968 90 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 CA1P00915 261 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 IGLC1P0CG04 106 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 PSG1P11464 419 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 MYCNOSP40205 109 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 TCL1AP56279 114 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 YPEL3P61236 119 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 RPEL1Q2QD12 228 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 VMO1Q7Z5L0 202 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 TMEM256Q8N2U0 113 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 FAM168AQ92567 244 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 RNF5Q99942 180 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 UBTD1Q9HAC8 227 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 S4R3C0 116 aa6.31□□□□□ -1.4
PDLIM5-204ENST00000380176 GRIFINA4D1Z8 144 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 HES1Q14469 280 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 CDC42EP3Q9UKI2 254 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 K7EIM0 57 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 CORTO00230 105 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 PEX7O00628 323 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 HYPMO75409 117 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 GPR6P46095 362 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 IER3P46695 156 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 PKIAP61925 76 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 IBA57Q5T440 356 aaKnown RBP6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 OR1L6Q8NGR2 347 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 ITLN2Q8WWU7 325 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 OSTCQ9NRP0 149 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 PIEZO1Q92508 2521 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 CFAP46Q8IYW2 2715 aa6.3□□□□□ -1.4
PDLIM5-204ENST00000380176 NDUFA3O95167 84 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 IGKV1-17P01599 117 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 NBEAP1P0C6P0 100 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 GP9P14770 177 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 GNLYP22749 145 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 LYZP61626 148 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 PAX2Q02962 417 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 SCGB2A2Q13296 93 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 NPBQ8NG41 125 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 BTF3L4Q96K17 158 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 TMEM208Q9BTX3 173 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 SERTAD4Q9NUC0 356 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 TP53TG3Q9ULZ0 132 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 CACNA1BQ00975 2339 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 PGPA6NDG6 321 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 K7EP13 123 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 HIST1H1BP16401 226 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 HOXB4P17483 251 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms