RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CHEK1O14757 476 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 IGKV1-13P0DP09 117 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 CBLN1P23435 193 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 TDRG1Q3Y452 100 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 BPIFA4PQ86YQ2 179 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 TNFRSF14Q92956 283 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 BET1LQ9NYM9 111 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 NAT8Q9UHE5 227 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 NAT8BQ9UHF3 227 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 TCF19Q9Y242 345 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 CDS2O95674 445 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 HSPB1P04792 205 aaKnown RBP5.31□□□□□ -1.56
NEDD9-202ENST00000379446 SLC38A11Q08AI6 406 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 C5orf64Q2M2E5 130 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 SELENOHQ8IZQ5 122 aaKnown RBP5.31□□□□□ -1.56
NEDD9-202ENST00000379446 C1orf159Q96HA4 380 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
NEDD9-202ENST00000379446 VCANP13611 3396 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 C22orf46C9J442 243 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 MAS1LP35410 378 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 PNRC1Q12796 327 aaPredicted RBP5.31□□□□□ -1.56
NEDD9-202ENST00000379446 TCTEX1D4Q5JR98 221 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 NPIPB3Q92617 1050 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 VSIRQ9H7M9 311 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 SRD5A3Q9H8P0 318 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 BUB1B-PAK6H3BSN5 160 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 NDUFB8O95169 186 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 IGHV3-53P01767 116 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 ELANEP08246 267 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 RANP62826 216 aaKnown RBP5.3□□□□□ -1.56
NEDD9-202ENST00000379446 HIST3H3Q16695 136 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 ATP6V1FQ16864 119 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 C19orf54Q5BKX5 351 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 SEM1Q6ZVN7 128 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 CFHR4Q92496 578 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 PLSCR2Q9NRY7 297 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 TECRQ9NZ01 308 aaKnown RBP5.3□□□□□ -1.56
NEDD9-202ENST00000379446 SLC45A2Q9UMX9 530 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 POLR3KQ9Y2Y1 108 aaPredicted RBP5.3□□□□□ -1.56
NEDD9-202ENST00000379446 B4DEV8 164 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 LINC00869P0C866 280 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 BLCAPP62952 87 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 RNASEKQ6P5S7 137 aaKnown RBP5.3□□□□□ -1.56
NEDD9-202ENST00000379446 SAXO1Q8IYX7 474 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 C15orf53Q8NAA6 179 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 GATAD1Q8WUU5 269 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 TAF15Q92804 592 aaKnown RBP eCLIP5.3□□□□□ -1.563e-6■□□□□ 9.1
NEDD9-202ENST00000379446 VAX2Q9UIW0 290 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 TRAV9-2A0A087WT02 112 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 ZNF253O75346 499 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 FCER1GP30273 86 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 NTF4P34130 210 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 HSPE1P61604 102 aaKnown RBP5.3□□□□□ -1.56
NEDD9-202ENST00000379446 MRPL54Q6P161 138 aaKnown RBP5.3□□□□□ -1.56
NEDD9-202ENST00000379446 FAM19A2Q8N3H0 131 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 TMEM116Q8NCL8 245 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 GPR146Q96CH1 333 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 USMG5Q96IX5 58 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 RCHY1Q96PM5 261 aa5.3□□□□□ -1.56
NEDD9-202ENST00000379446 SAA2-SAA4A0A096LPE2 208 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 DUSP14O95147 198 aaKnown RBP5.29□□□□□ -1.56
NEDD9-202ENST00000379446 LHBP01229 141 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 SAA2P0DJI9 122 aaPredicted RBP5.29□□□□□ -1.56
NEDD9-202ENST00000379446 FFAR4Q5NUL3 377 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 ZNF645Q8N7E2 425 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 GAFA1Q96PS6 74 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 ANAPC10Q9UM13 185 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 DUXBA0A1W2PPF3 345 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 SYNGR2O43760 224 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 PGLYRP1O75594 196 aaPredicted RBP5.29□□□□□ -1.56
NEDD9-202ENST00000379446 CD1BP29016 333 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 RPL24P83731 157 aaKnown RBP5.29□□□□□ -1.56
NEDD9-202ENST00000379446 NDPQ00604 133 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 OR51G1Q8NGK1 321 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 PARLQ9H300 379 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 LYRM2Q9NU23 88 aaPredicted RBP5.29□□□□□ -1.56
NEDD9-202ENST00000379446 SIGLEC8Q9NYZ4 499 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 NBEAL1Q6ZS30 2694 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 IGLV3-9A0A075B6K5 115 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 ATP6V0E1O15342 81 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 SNAI2O43623 268 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 RAMP3O60896 148 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 HSBP1O75506 76 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 ZNF56Q15929 161 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 HAPLN4Q86UW8 402 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 ZNF295-AS1Q8N0V1 137 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 MEGF9Q9H1U4 602 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 AP5S1Q9NUS5 200 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 PHLDA3Q9Y5J5 127 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 SPEGQ15772 3267 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 NPIPB6E9PJ23 425 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 NDUFB4O95168 129 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 IL15RAQ13261 267 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 C5orf17Q8NAS9 161 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 MIEN1Q9BRT3 115 aa5.29□□□□□ -1.56
NEDD9-202ENST00000379446 WDR61Q9GZS3 305 aaKnown RBP5.29□□□□□ -1.56
NEDD9-202ENST00000379446 TRGV1A0A0A0MS02 117 aa5.28□□□□□ -1.56
NEDD9-202ENST00000379446 LOC102723971A0A1B0GUV8 181 aa5.28□□□□□ -1.56
NEDD9-202ENST00000379446 C11orf94C9JXX5 98 aa5.28□□□□□ -1.56
NEDD9-202ENST00000379446 MPDU1O75352 247 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms