RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 OR5C1Q8NGR4 320 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 MARC2Q969Z3 335 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 UQCC1Q9NVA1 299 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 MLXQ9UH92 298 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 SMPXQ9UHP9 88 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 TP53TG1Q9Y2A0 90 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 KLK5Q9Y337 293 aaPredicted RBP9.04□□□□□ -0.96
LSM2-208ENST00000375661 HSPB11Q9Y547 144 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 SELENOKQ9Y6D0 94 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 FRAS1Q86XX4 4008 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 IGHV3-49A0A0A0MS15 119 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 A0A1B0GVG6 124 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 SMLR1H3BR10 107 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
LSM2-208ENST00000375661 IL4P05112 153 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 HBG1P69891 147 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 HBG2P69892 147 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 TEPPQ6URK8 271 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 CYP2G1PQ6ZSU1 146 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 LILRB2Q8N423 598 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 OR51G1Q8NGK1 321 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 MGST2Q99735 147 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 TMEM147Q9BVK8 224 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 U3KQE9 123 aa9.03□□□□□ -0.96
LSM2-208ENST00000375661 hCG_2014768A0A024R1R8 64 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 IGHV3OR16-13A0A075B7E8 117 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 IGHV3-74A0A0B4J1X5 117 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 CHEK1O14757 476 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 FABP1P07148 127 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 CRYBB3P26998 211 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 PMS2P11Q13670 270 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 BTNL8Q6UX41 500 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 STPG3Q8N7X2 389 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 RNF125Q96EQ8 232 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 ST6GAL2Q96JF0 529 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 GINS3Q9BRX5 216 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 VSIRQ9H7M9 311 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 WFDC1Q9HC57 220 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 SLC45A2Q9UMX9 530 aa9.02□□□□□ -0.97
LSM2-208ENST00000375661 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 UBE2L5PA0A1B0GUS4 154 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 AGPAT2O15120 278 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 NPPCP23582 126 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 BMI1P35226 326 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 LYZP61626 148 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 CLINT1Q14677 625 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 Q6ZWC4 215 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 TMEM61Q8N0U2 210 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 BPIFCQ8NFQ6 507 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 ST8SIA2Q92186 375 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 AQP10Q96PS8 301 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 METTL26Q96S19 204 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 SMIM3Q9BZL3 60 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 TNFSF18Q9UNG2 199 aa9.01□□□□□ -0.97
LSM2-208ENST00000375661 FXYD6-FXYD2A0A087WZ82 144 aa9□□□□□ -0.97
LSM2-208ENST00000375661 IGHV3-66A0A0C4DH42 116 aa9□□□□□ -0.97
LSM2-208ENST00000375661 A0A0J9YWU9 116 aa9□□□□□ -0.97
LSM2-208ENST00000375661 UBE2CO00762 179 aa9□□□□□ -0.97
LSM2-208ENST00000375661 CFDP00746 253 aaPredicted RBP9□□□□□ -0.97
LSM2-208ENST00000375661 HNRNPCP07910 306 aaKnown RBP eCLIP9□□□□□ -0.97
LSM2-208ENST00000375661 CAMLGP49069 296 aa9□□□□□ -0.97
LSM2-208ENST00000375661 APOC4P55056 127 aa9□□□□□ -0.97
LSM2-208ENST00000375661 SELENOTP62341 195 aa9□□□□□ -0.97
LSM2-208ENST00000375661 OPCMLQ14982 345 aa9□□□□□ -0.97
LSM2-208ENST00000375661 FAM90A2PQ658T7 463 aa9□□□□□ -0.97
LSM2-208ENST00000375661 LGALS9CQ6DKI2 356 aa9□□□□□ -0.97
LSM2-208ENST00000375661 ZNF546Q86UE3 836 aa9□□□□□ -0.97
LSM2-208ENST00000375661 OR11H4Q8NGC9 324 aa9□□□□□ -0.97
LSM2-208ENST00000375661 RNF2Q99496 336 aa9□□□□□ -0.97
LSM2-208ENST00000375661 ATP5SQ99766 215 aa9□□□□□ -0.97
LSM2-208ENST00000375661 PBDC1Q9BVG4 233 aa9□□□□□ -0.97
LSM2-208ENST00000375661 RABAC1Q9UI14 185 aa9□□□□□ -0.97
LSM2-208ENST00000375661 SPRY2O43597 315 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 BUB3O43684 328 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 LINC00869P0C866 280 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 FGF7P21781 194 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 EIF2B2P49770 351 aaKnown RBP8.99□□□□□ -0.97
LSM2-208ENST00000375661 PLP1P60201 277 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 PRR20EP86478 221 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 PRR20CP86479 221 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 PRR20DP86480 221 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 PRR20BP86481 221 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 PRR20AP86496 221 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 MIC13Q5XKP0 118 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 PATE2Q6UY27 113 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 RPP25LQ8N5L8 163 aaKnown RBP8.99□□□□□ -0.97
LSM2-208ENST00000375661 WDR61Q9GZS3 305 aaKnown RBP8.99□□□□□ -0.97
LSM2-208ENST00000375661 FBXL17Q9UF56 701 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 KMT2AQ03164 3969 aa8.99□□□□□ -0.97
LSM2-208ENST00000375661 DFFBO76075 338 aa8.98□□□□□ -0.97
LSM2-208ENST00000375661 ORM2P19652 201 aa8.98□□□□□ -0.97
LSM2-208ENST00000375661 NUP62P37198 522 aaPredicted RBP8.98□□□□□ -0.97
LSM2-208ENST00000375661 RPL29P47914 159 aaKnown RBP8.98□□□□□ -0.97
LSM2-208ENST00000375661 RAB31Q13636 194 aa8.98□□□□□ -0.97
LSM2-208ENST00000375661 C16orf54Q6UWD8 224 aa8.98□□□□□ -0.97
LSM2-208ENST00000375661 INO80EQ8NBZ0 244 aaPredicted RBP8.98□□□□□ -0.97
LSM2-208ENST00000375661 NPCDR1Q9BY65 106 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms