RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 DEFB4AO15263 64 aa11.35□□□□□ -0.59
SDHB-201ENST00000375499 RRAS2P62070 204 aaPredicted RBP11.35□□□□□ -0.59
SDHB-201ENST00000375499 GDF5OSQ5U4N7 250 aa11.35□□□□□ -0.59
SDHB-201ENST00000375499 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
SDHB-201ENST00000375499 ZNF431Q8TF32 576 aaPredicted RBP11.35□□□□□ -0.59
SDHB-201ENST00000375499 FABP1P07148 127 aa11.34□□□□□ -0.59
SDHB-201ENST00000375499 H2AFB2P0C5Z0 115 aa11.34□□□□□ -0.59
SDHB-201ENST00000375499 IFITM3Q01628 133 aa11.34□□□□□ -0.59
SDHB-201ENST00000375499 LINC00299Q6ZSB3 139 aa11.34□□□□□ -0.59
SDHB-201ENST00000375499 SLC25A32Q9H2D1 315 aa11.34□□□□□ -0.59
SDHB-201ENST00000375499 C11orf1Q9H5F2 150 aa11.34□□□□□ -0.59
SDHB-201ENST00000375499 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
SDHB-201ENST00000375499 C7orf66A4D0T2 115 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
SDHB-201ENST00000375499 ASAH1Q13510 395 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 LINC00476Q8WZB0 136 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 PPP1R14BQ96C90 147 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 DOK5Q9P104 306 aa11.33□□□□□ -0.6
SDHB-201ENST00000375499 FAM240BA0A1B0GVZ2 78 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 ZNF98A6NK75 572 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 FAM25EA8MYX2 175 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 H3BMM0 161 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 K7EPK0 472 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 TSC22D2O75157 780 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 SPP1P10451 314 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 ATF4P18848 351 aaPredicted RBP11.32□□□□□ -0.6
SDHB-201ENST00000375499 ORM2P19652 201 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 SNRPD3P62318 126 aaKnown RBP11.32□□□□□ -0.6
SDHB-201ENST00000375499 DLK1P80370 383 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 Q8NAQ8 132 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 CSNK1G2-AS1Q8NCQ2 148 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 BPIFCQ8NFQ6 507 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 OR1B1Q8NGR6 318 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 S100ZQ8WXG8 99 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 C20orf173Q96LM9 149 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 SCRT1Q9BWW7 348 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
SDHB-201ENST00000375499 SLC25A22Q9H936 323 aa11.32□□□□□ -0.6
SDHB-201ENST00000375499 SEPSECSQ9HD40 501 aaKnown RBP11.32□□□□□ -0.6
SDHB-201ENST00000375499 H3BRN7 92 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 UPK1BO75841 260 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 HLA-DRB4P13762 266 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 TAS2R30P59541 319 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 SLC38A11Q08AI6 406 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
SDHB-201ENST00000375499 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 C12orf45Q8N5I9 185 aaPredicted RBP11.31□□□□□ -0.6
SDHB-201ENST00000375499 PTTG2Q9NZH5 202 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 LSM5Q9Y4Y9 91 aaKnown RBP11.31□□□□□ -0.6
SDHB-201ENST00000375499 HLA-DRB4X5D2U9 266 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 X6R8D5 127 aa11.31□□□□□ -0.6
SDHB-201ENST00000375499 KMT2AQ03164 3969 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 C5orf51A6NDU8 294 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 ZNF705EA8MWA4 302 aaPredicted RBP11.3□□□□□ -0.6
SDHB-201ENST00000375499 F6UB75 175 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 RBMY1A1P0DJD3 496 aaKnown RBP11.3□□□□□ -0.6
SDHB-201ENST00000375499 RBMY1CP0DJD4 496 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 PSMB3P49720 205 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
SDHB-201ENST00000375499 RBMY1FQ15415 496 aaKnown RBP11.3□□□□□ -0.6
SDHB-201ENST00000375499 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 LINC00052Q96N35 136 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
SDHB-201ENST00000375499 IGHV4-28A0A0C4DH34 117 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 CFDP00746 253 aaPredicted RBP11.29□□□□□ -0.6
SDHB-201ENST00000375499 IL5P05113 134 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 LINC00869P0C866 280 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 FXYD7P58549 80 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 IL15RAQ13261 267 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 ZNF846Q147U1 533 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 CEMP1Q6PRD7 247 aaPredicted RBP11.29□□□□□ -0.6
SDHB-201ENST00000375499 OR10P1Q8NGE3 313 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 TMEM147Q9BVK8 224 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
SDHB-201ENST00000375499 XCL2Q9UBD3 114 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 VPS13DQ5THJ4 4388 aa11.29□□□□□ -0.6
SDHB-201ENST00000375499 NUPR2A6NF83 97 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 FNDC10F2Z333 226 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 LY6G6CO95867 125 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 PLP1P60201 277 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 MZT2BQ6NZ67 158 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 PATE2Q6UY27 113 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 TMEM217Q8N7C4 229 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 ZNF709Q8N972 641 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 PHLDA1Q8WV24 401 aaPredicted RBP11.28□□□□□ -0.6
SDHB-201ENST00000375499 C2orf50Q96LR7 162 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 SHANK2-AS3Q9BTD1 123 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 SAV1Q9H4B6 383 aaPredicted RBP11.28□□□□□ -0.6
SDHB-201ENST00000375499 NPVFQ9HCQ7 196 aa11.28□□□□□ -0.6
SDHB-201ENST00000375499 ELOA3CA0A087WX78 387 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms