RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 MAP1LC3BQ9GZQ8 125 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 IGHV3-35A0A0C4DH35 117 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 A0A1W2PPV4 95 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 ADARB2-AS1A8MUL3 147 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 HBE1P02100 147 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 H2AFB1P0C5Y9 115 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 STAG3L2P0CL84 134 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 STAG3L3P0CL85 134 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 ZP3P21754 424 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 FHL3Q13643 280 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 KRTAP24-1Q3LI83 254 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 AWAT1Q58HT5 328 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 MIR17HGQ75NE6 70 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 REC114Q7Z4M0 266 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 S100A7AQ86SG5 101 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 PCNPQ8WW12 178 aaKnown RBP13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 SLC25A39Q9BZJ4 359 aaPredicted RBP13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 TECRQ9NZ01 308 aaKnown RBP13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 SETD2Q9BYW2 2564 aaPredicted RBP13.2□□□□□ -0.3
HLA-DMA-201ENST00000374843 A8MWP6 167 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 S100A7P31151 101 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 UNQ9165/PRO28630Q6UXU0 137 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 NDUFA11Q86Y39 141 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 FAM167A-AS1Q96KT0 104 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 UHRF2Q96PU4 802 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 MED9Q9NWA0 146 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 U3KQE9 123 aa13.19□□□□□ -0.3
HLA-DMA-201ENST00000374843 NUDT19A8MXV4 375 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 LINC01619G3V211 115 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 LGALS9O00182 355 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 C8orf88P0DMB2 117 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 CRYBB3P26998 211 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 HOXD3P31249 432 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 TAS2R45P59539 299 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 RPEL1Q2QD12 228 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 LCN15Q6UWW0 184 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 SFT2D1Q8WV19 159 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 SCRT1Q9BWW7 348 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 SLC25A2Q9BXI2 301 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
HLA-DMA-201ENST00000374843 LINC00862A6NCI5 91 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 TEX46H3BTG2 121 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 K7EMT4 169 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 DEFB136Q30KP8 78 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 FAM106AQ4KMX7 169 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 PQLC2Q6ZP29 291 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 C8orf86Q6ZUL3 223 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 C1QL4Q86Z23 238 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 OR1N2Q8NGR9 330 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 METTL26Q96S19 204 aa13.17□□□□□ -0.3
HLA-DMA-201ENST00000374843 ZNF98A6NK75 572 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 EIF3GO75821 320 aaKnown RBP eCLIP13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 CXorf1O96002 111 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 ARL14EPLP0DKL9 152 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 PMS2P11Q13670 270 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 KLF5Q13887 457 aaPredicted RBP13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 STXBP6Q8NFX7 210 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 OR11H1Q8NG94 326 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 RAX2Q96IS3 184 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 HRH4Q9H3N8 390 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 TMEM14CQ9P0S9 112 aa13.16□□□□□ -0.3
HLA-DMA-201ENST00000374843 ATRQ13535 2644 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 IGHV3OR16-8A0A075B7F1 116 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 HMGB3O15347 200 aaKnown RBP13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 GP9P14770 177 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 C1orf194Q5T5A4 169 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 HIST2H2BDQ6DRA6 164 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 IL34Q6ZMJ4 242 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 SUN5Q8TC36 379 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 CITED1Q99966 193 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 PFDN2Q9UHV9 154 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 UFC1Q9Y3C8 167 aa13.15□□□□□ -0.3
HLA-DMA-201ENST00000374843 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
HLA-DMA-201ENST00000374843 TMEM213A2RRL7 107 aa13.14□□□□□ -0.31
HLA-DMA-201ENST00000374843 BUB3O43684 328 aa13.14□□□□□ -0.31
HLA-DMA-201ENST00000374843 NPPCP23582 126 aa13.14□□□□□ -0.31
HLA-DMA-201ENST00000374843 GCHFRP30047 84 aa13.14□□□□□ -0.31
HLA-DMA-201ENST00000374843 FGF8P55075 233 aaPredicted RBP13.14□□□□□ -0.31
HLA-DMA-201ENST00000374843 DPF1Q92782 380 aa13.14□□□□□ -0.31
HLA-DMA-201ENST00000374843 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
HLA-DMA-201ENST00000374843 CCL24O00175 119 aa13.13□□□□□ -0.31
HLA-DMA-201ENST00000374843 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
HLA-DMA-201ENST00000374843 PSMB3P49720 205 aa13.13□□□□□ -0.31
HLA-DMA-201ENST00000374843 SLURP1P55000 103 aa13.13□□□□□ -0.31
HLA-DMA-201ENST00000374843 CCL20P78556 96 aa13.13□□□□□ -0.31
HLA-DMA-201ENST00000374843 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
HLA-DMA-201ENST00000374843 IGHV7-4-1A0A0J9YVY3 117 aa13.12□□□□□ -0.31
HLA-DMA-201ENST00000374843 ZNF320A2RRD8 509 aa13.12□□□□□ -0.31
HLA-DMA-201ENST00000374843 ZNF207O43670 478 aaKnown RBP13.12□□□□□ -0.31
HLA-DMA-201ENST00000374843 OR7C2O60412 319 aa13.12□□□□□ -0.31
HLA-DMA-201ENST00000374843 PPT1P50897 306 aa13.12□□□□□ -0.31
HLA-DMA-201ENST00000374843 SYNJ2BPP57105 145 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms