RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 RBPMS2Q6ZRY4 209 aaKnown RBP11.3□□□□□ -0.6
HSPG2-201ENST00000374673 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-201ENST00000374673 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 AURKAIP1Q9NWT8 199 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-201ENST00000374673 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 IGHV3-66A0A0C4DH42 116 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 A0A1B0GVG6 124 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 IFNA5P01569 189 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 ORM2P19652 201 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 S100A7P31151 101 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 MIC13Q5XKP0 118 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 TCF24Q7RTU0 167 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 TCTE3Q8IZS6 198 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 STPG3Q8N7X2 389 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 SPAG8Q99932 426 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-201ENST00000374673 NEURL2Q9BR09 285 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 SORL1Q92673 2214 aa11.29□□□□□ -0.6
HSPG2-201ENST00000374673 HMSDA8MTL9 139 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 ARPC5O15511 151 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 HYPMO75409 117 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 B2MP61769 119 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 ZNF266Q14584 549 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 Q6ZRG5 221 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 OR11H4Q8NGC9 324 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 PRR25Q96S07 402 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 ARL6Q9H0F7 186 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 KCNIP2Q9NS61 270 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 SLC39A9Q9NUM3 307 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 DOK5Q9P104 306 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 HIGD1AQ9Y241 93 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
HSPG2-201ENST00000374673 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 H3BRN7 92 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 PRB2P02812 416 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-201ENST00000374673 OR5G3P0C626 314 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 AP2S1P53680 142 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-201ENST00000374673 DEFA6Q01524 100 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 ZNF345Q14585 488 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 GUCA2BQ16661 112 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 C1orf194Q5T5A4 169 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 AKAP14Q86UN6 197 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 SCGB1C1Q8TD33 95 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-201ENST00000374673 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 ARV1Q9H2C2 271 aa11.27□□□□□ -0.61
HSPG2-201ENST00000374673 DNAH3Q8TD57 4116 aa11.26□□□□□ -0.61
HSPG2-201ENST00000374673 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
HSPG2-201ENST00000374673 HELTA6NFD8 242 aa11.26□□□□□ -0.61
HSPG2-201ENST00000374673 ZNF98A6NK75 572 aa11.26□□□□□ -0.61
HSPG2-201ENST00000374673 ZNF709Q8N972 641 aa11.26□□□□□ -0.61
HSPG2-201ENST00000374673 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
HSPG2-201ENST00000374673 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
HSPG2-201ENST00000374673 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
HSPG2-201ENST00000374673 TRAV2A0A0B4J234 112 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 COX7A2P2O60397 106 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 UHRF2Q96PU4 802 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 PFDN5Q99471 154 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 RSG1Q9BU20 258 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 RNF24Q9Y225 148 aa11.25□□□□□ -0.61
HSPG2-201ENST00000374673 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 K7EIL1 84 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 TAAR5O14804 337 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 C1QBP02746 253 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 RPL11P62913 178 aaKnown RBP11.24□□□□□ -0.61
HSPG2-201ENST00000374673 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 LINC00305Q7Z4B0 112 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 OR8I2Q8N0Y5 310 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 Q8N1Y9 231 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 KCNRGQ8N5I3 272 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 GATAD1Q8WUU5 269 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 GPR82Q96P67 336 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 SCRT1Q9BWW7 348 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 MS4A6AQ9H2W1 248 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 DNAJC4Q9NNZ3 241 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
HSPG2-201ENST00000374673 IGKV3-7A0A075B6H7 116 aa11.23□□□□□ -0.61
HSPG2-201ENST00000374673 A0A0D9SG52 128 aa11.23□□□□□ -0.61
HSPG2-201ENST00000374673 CD7P09564 240 aa11.23□□□□□ -0.61
HSPG2-201ENST00000374673 CD81P60033 236 aa11.23□□□□□ -0.61
HSPG2-201ENST00000374673 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
HSPG2-201ENST00000374673 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
HSPG2-201ENST00000374673 BORCS7-ASMTA0A0B4J1R7 106 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
HSPG2-201ENST00000374673 CXCL2P19875 107 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 LEMD1Q68G75 181 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 RPL7L1Q6DKI1 246 aaKnown RBP11.22□□□□□ -0.61
HSPG2-201ENST00000374673 GBGT1Q8N5D6 347 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 HSD17B11Q8NBQ5 300 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 STXBP6Q8NFX7 210 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 DCANP1Q8TF63 244 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 FAM110AQ9BQ89 295 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms