RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 FAM173AQ9BQD7 235 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 SAP30LQ9HAJ7 183 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 CALYQ9NYX4 217 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 INTS1Q8N201 2190 aaKnown RBP4.36□□□□□ -1.71
ATG4A-204ENST00000372246 TRAV9-1A0A075B6T8 112 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 GAGE10A6NGK3 116 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 IQCF6A8MYZ5 107 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 SMKR1H3BMG3 65 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 KLRC4-KLRK1H3BQV0 150 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 COX7A2P2O60397 106 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CLEC3BP05452 202 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CECR9P0C854 216 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 IGLC1P0CG04 106 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 RNASE2P10153 161 aaKnown RBP4.35□□□□□ -1.71
ATG4A-204ENST00000372246 GPR183P32249 361 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CFHR2P36980 270 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 WT1-ASQ06250 92 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 RAB31Q13636 194 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 GUSBP1Q15486 140 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 C17orf58Q2M2W7 97 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 LCNL1Q6ZST4 164 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 LINC00305Q7Z4B0 112 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 Q8IYB0 196 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 FXYD5Q96DB9 178 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 PERPQ96FX8 193 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CCL13Q99616 98 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 PAXXQ9BUH6 204 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 COMMD5Q9GZQ3 224 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 TMEM167BQ9NRX6 74 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 C1RLQ9NZP8 487 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 MRPL27Q9P0M9 148 aaKnown RBP4.35□□□□□ -1.71
ATG4A-204ENST00000372246 RABAC1Q9UI14 185 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 hADV38S2A0JD32 116 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 PSMB11A5LHX3 300 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 EIF4EBP3O60516 100 aaPredicted RBP4.35□□□□□ -1.71
ATG4A-204ENST00000372246 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CT45A6P0DMU7 189 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CT45A5P0DMU8 189 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CT45A7P0DMV0 189 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CCL3L1P16619 93 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 LGALS7P47929 136 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 TIMM23BQ5SRD1 257 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 FER1L6-AS1Q8NA97 138 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 OR4S2Q8NH73 311 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 GLMPQ8WWB7 406 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 DUSP23Q9BVJ7 150 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 GTSF1LQ9H1H1 148 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 THYN1Q9P016 225 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 ABI3Q9P2A4 366 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 ZNF257Q9Y2Q1 563 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 BSNQ9UPA5 3926 aa4.35□□□□□ -1.71
ATG4A-204ENST00000372246 CACNA1BQ00975 2339 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 PCNX1Q96RV3 2341 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 IGKV1D-37A0A075B6S9 117 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 A0A1B0GXF2 115 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 CGB1A6NKQ9 187 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 ZNF785A8K8V0 405 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 CHEK1O14757 476 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 APOHP02749 345 aaPredicted RBP4.34□□□□□ -1.71
ATG4A-204ENST00000372246 HTR1DP28221 377 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 CRYBA4P53673 196 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 HBBP68871 147 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
ATG4A-204ENST00000372246 NRN1LQ496H8 165 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 C22orf34Q6ZV56 151 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 PRNTQ86SH4 94 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 BCL6BQ8N143 479 aaPredicted RBP4.34□□□□□ -1.71
ATG4A-204ENST00000372246 PNKDQ8N490 385 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 C5orf17Q8NAS9 161 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 GRAMD2BQ96HH9 432 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 TXNDC17Q9BRA2 123 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 MRPL20Q9BYC9 149 aaKnown RBP4.34□□□□□ -1.71
ATG4A-204ENST00000372246 CXXC4Q9H2H0 198 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 LY96Q9Y6Y9 160 aa4.34□□□□□ -1.71
ATG4A-204ENST00000372246 MAP1AP78559 2803 aaPredicted RBP4.34□□□□□ -1.71
ATG4A-204ENST00000372246 NTN3O00634 580 aaPredicted RBP4.34□□□□□ -1.72
ATG4A-204ENST00000372246 CNTFRP26992 372 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 IFI27P40305 119 aaPredicted RBP4.34□□□□□ -1.72
ATG4A-204ENST00000372246 NMUP48645 174 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 SMAGPQ0VAQ4 97 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 KLF5Q13887 457 aaPredicted RBP4.34□□□□□ -1.72
ATG4A-204ENST00000372246 C10orf113Q5VZT2 155 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 C6orf15Q6UXA7 325 aaPredicted RBP4.34□□□□□ -1.72
ATG4A-204ENST00000372246 RPRMLQ8N4K4 120 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 WDR31Q8NA23 367 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 RPUSD1Q9UJJ7 312 aaKnown RBP4.34□□□□□ -1.72
ATG4A-204ENST00000372246 FOXA2Q9Y261 457 aaPredicted RBP4.34□□□□□ -1.72
ATG4A-204ENST00000372246 MSRB2Q9Y3D2 182 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 SPTBN2O15020 2390 aa4.34□□□□□ -1.72
ATG4A-204ENST00000372246 PIGBOS1A0A0B4J2F0 54 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 SPAARA0A1B0GVQ0 90 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 TMEM213A2RRL7 107 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 MGST3O14880 152 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 TNFSF15O95150 251 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 FSTL3O95633 263 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 ADH4P08319 380 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms