RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
EFNA1-201ENST00000368406 RPL7L1Q6DKI1 246 aaKnown RBP9.63□□□□□ -0.87
EFNA1-201ENST00000368406 RSG1Q9BU20 258 aa9.63□□□□□ -0.87
EFNA1-201ENST00000368406 ZNF471Q9BX82 626 aaPredicted RBP9.63□□□□□ -0.87
EFNA1-201ENST00000368406 PARD6GQ9BYG4 376 aaPredicted RBP9.63□□□□□ -0.87
EFNA1-201ENST00000368406 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
EFNA1-201ENST00000368406 HIGD1AQ9Y241 93 aa9.63□□□□□ -0.87
EFNA1-201ENST00000368406 IGHV3-66A0A0C4DH42 116 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 IGHV7-4-1A0A0J9YVY3 117 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 WI2-2373I1.2A0A1W2PRP0 233 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 A0A1W2PS18 150 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 EDN2P20800 178 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 CBLN1P23435 193 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
EFNA1-201ENST00000368406 PXDC1Q5TGL8 231 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 TMEM182Q6ZP80 229 aaPredicted RBP9.62□□□□□ -0.87
EFNA1-201ENST00000368406 OR1L4Q8NGR5 311 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 PFDN5Q99471 154 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 SLC39A9Q9NUM3 307 aa9.62□□□□□ -0.87
EFNA1-201ENST00000368406 MRPL27Q9P0M9 148 aaKnown RBP9.62□□□□□ -0.87
EFNA1-201ENST00000368406 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
EFNA1-201ENST00000368406 CSN3P07498 182 aa9.61□□□□□ -0.87
EFNA1-201ENST00000368406 INSL3P51460 131 aa9.61□□□□□ -0.87
EFNA1-201ENST00000368406 RPL11P62913 178 aaKnown RBP9.61□□□□□ -0.87
EFNA1-201ENST00000368406 EIF5AP63241 154 aaKnown RBP9.61□□□□□ -0.87
EFNA1-201ENST00000368406 FFAR4Q5NUL3 377 aa9.61□□□□□ -0.87
EFNA1-201ENST00000368406 C10orf113Q5VZT2 155 aa9.61□□□□□ -0.87
EFNA1-201ENST00000368406 GNPNAT1Q96EK6 184 aaPredicted RBP9.61□□□□□ -0.87
EFNA1-201ENST00000368406 RHPN1-AS1Q9BWJ2 59 aa9.61□□□□□ -0.87
EFNA1-201ENST00000368406 SLC25A22Q9H936 323 aa9.61□□□□□ -0.87
EFNA1-201ENST00000368406 SELENOKQ9Y6D0 94 aa9.61□□□□□ -0.87
EFNA1-201ENST00000368406 CRYBB3P26998 211 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 NKX2-5P52952 324 aaPredicted RBP9.6□□□□□ -0.87
EFNA1-201ENST00000368406 PRR20EP86478 221 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 PRR20CP86479 221 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 PRR20DP86480 221 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 PRR20BP86481 221 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 PRR20AP86496 221 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 RBPMS2Q6ZRY4 209 aaKnown RBP9.6□□□□□ -0.87
EFNA1-201ENST00000368406 ST8SIA2Q92186 375 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 ZNF414Q96IQ9 312 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 ARV1Q9H2C2 271 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 SMPXQ9UHP9 88 aa9.6□□□□□ -0.87
EFNA1-201ENST00000368406 ELOA3CA0A087WX78 387 aaPredicted RBP9.59□□□□□ -0.87
EFNA1-201ENST00000368406 APOHP02749 345 aaPredicted RBP9.59□□□□□ -0.87
EFNA1-201ENST00000368406 ATP6V0CP27449 155 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 LGALSLQ3ZCW2 172 aaPredicted RBP9.59□□□□□ -0.87
EFNA1-201ENST00000368406 LAMTOR1Q6IAA8 161 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 C9orf62Q8N4C0 152 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 SH3BGRL3Q9H299 93 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 TECRQ9NZ01 308 aaKnown RBP9.59□□□□□ -0.87
EFNA1-201ENST00000368406 MLXQ9UH92 298 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 RNF24Q9Y225 148 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 TIMM9Q9Y5J7 89 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 DNAH3Q8TD57 4116 aa9.59□□□□□ -0.87
EFNA1-201ENST00000368406 CHEK1O14757 476 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 TPT1P13693 172 aaKnown RBP9.58□□□□□ -0.88
EFNA1-201ENST00000368406 PLP1P60201 277 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 KRTAP10-11P60412 298 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 ACOT6Q3I5F7 207 aaPredicted RBP9.58□□□□□ -0.88
EFNA1-201ENST00000368406 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 IL34Q6ZMJ4 242 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 LINC00305Q7Z4B0 112 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 OR8I2Q8N0Y5 310 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 UHRF2Q96PU4 802 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 PSMG3Q9BT73 122 aaPredicted RBP9.58□□□□□ -0.88
EFNA1-201ENST00000368406 SCRT1Q9BWW7 348 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 SLC25A39Q9BZJ4 359 aaPredicted RBP9.58□□□□□ -0.88
EFNA1-201ENST00000368406 SLC25A32Q9H2D1 315 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 DNAJC4Q9NNZ3 241 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 SIGLEC8Q9NYZ4 499 aa9.58□□□□□ -0.88
EFNA1-201ENST00000368406 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 BOLA2-SMG1P6H3BVE0 249 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 C8orf88P0DMB2 117 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 GUCA2BQ16661 112 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 TCF24Q7RTU0 167 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 OR2G3Q8NGZ4 309 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 RNF2Q99496 336 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 CYTL1Q9NRR1 136 aa9.57□□□□□ -0.88
EFNA1-201ENST00000368406 HELTA6NFD8 242 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 H3BRN7 92 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 IGLV1-51P01701 117 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 MBP02144 154 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 CD5P06127 495 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 DEFB114Q30KQ6 69 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 CD300EQ496F6 205 aaPredicted RBP9.56□□□□□ -0.88
EFNA1-201ENST00000368406 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 AKR1C8PQ5T2L2 129 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 FAM78BQ5VT40 261 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 LEMD1Q68G75 181 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 SIGLEC15Q6ZMC9 328 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 OR2K2Q8NGT1 345 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 GATAD1Q8WUU5 269 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 VSIRQ9H7M9 311 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 AURKAIP1Q9NWT8 199 aaPredicted RBP9.56□□□□□ -0.88
EFNA1-201ENST00000368406 RFNGQ9Y644 331 aa9.56□□□□□ -0.88
EFNA1-201ENST00000368406 PRKDCP78527 4128 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms