RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 HSPB8Q9UJY1 196 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 NUPR2A6NF83 97 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 NDUFA3O95167 84 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 IGHG4P01861 327 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 GOLT1AQ6ZVE7 132 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 AHCTF1Q8WYP5 2266 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 IGKV3-20P01619 116 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 ATP6V0CP27449 155 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 FHL1Q13642 323 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 C10orf126Q8N4M7 172 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 LINC00574Q9H8X3 128 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 LINC00527Q9UJ94 153 aa6.59□□□□□ -1.35
SSR2-202ENST00000368311 SPRY2O43597 315 aa6.59□□□□□ -1.36
SSR2-202ENST00000368311 IGF1P05019 195 aa6.59□□□□□ -1.36
SSR2-202ENST00000368311 BCL2P10415 239 aa6.59□□□□□ -1.36
SSR2-202ENST00000368311 ALKAL2Q6UX46 152 aa6.59□□□□□ -1.36
SSR2-202ENST00000368311 WDR86Q86TI4 376 aa6.59□□□□□ -1.36
SSR2-202ENST00000368311 ZNF48Q96MX3 618 aaPredicted RBP6.59□□□□□ -1.36
SSR2-202ENST00000368311 SOSTQ9BQB4 213 aa6.59□□□□□ -1.36
SSR2-202ENST00000368311 ZNF503-AS2A6NEH8 195 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 PEX7O00628 323 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 PAGE4O60829 102 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 ZNF253O75346 499 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 ATP5G1P05496 136 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 ATP5G3P48201 142 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 FHITP49789 147 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 BSXQ3C1V8 233 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 CLLU1Q5K131 121 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 TOMM20LQ6UXN7 152 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 SLC25A39Q9BZJ4 359 aaPredicted RBP6.58□□□□□ -1.36
SSR2-202ENST00000368311 PPP1R3EQ9H7J1 279 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 GEMIN7Q9H840 131 aaKnown RBP6.58□□□□□ -1.36
SSR2-202ENST00000368311 SDK2Q58EX2 2172 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 F5H768 121 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 PPBPP02775 128 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 FABP9Q0Z7S8 132 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 ZNF491Q8N8L2 437 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 OR10J3Q5JRS4 329 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 ICOSQ9Y6W8 199 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 SCO1O75880 301 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 C11orf53Q8IXP5 236 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 C15orf53Q8NAA6 179 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 TSKUQ8WUA8 353 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 TMEM14CQ9P0S9 112 aa6.58□□□□□ -1.36
SSR2-202ENST00000368311 SMIM6P0DI80 62 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 FOLR2P14207 255 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 ZNF295-AS1Q8N0V1 137 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 C1orf159Q96HA4 380 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 TRGV1A0A0A0MS02 117 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 CGB1A6NKQ9 187 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 STAG3L2P0CL84 134 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 IBA57Q5T440 356 aaKnown RBP6.57□□□□□ -1.36
SSR2-202ENST00000368311 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.57□□□□□ -1.36
SSR2-202ENST00000368311 PYGO2Q9BRQ0 406 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 KIR2DL5BA0A0G2JN68 375 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 KIR2DL5BA0A0G2JPC4 375 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 LINC01548A6NM66 108 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 DIRC3C9JPN6 131 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.57□□□□□ -1.36
SSR2-202ENST00000368311 GZMBP10144 247 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 ZFP36P26651 326 aaKnown RBP6.57□□□□□ -1.36
SSR2-202ENST00000368311 KIR2DL5AQ8N109 375 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 KIR2DL5BQ8NHK3 375 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 ACACAQ13085 2346 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 A0A087WWC5 75 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 LINC00862A6NCI5 91 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 TMEM250H0YL14 139 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 APCSP02743 223 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 RNASE2P10153 161 aaKnown RBP6.57□□□□□ -1.36
SSR2-202ENST00000368311 QRFPP83859 136 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
SSR2-202ENST00000368311 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 BBC3Q96PG8 261 aaPredicted RBP6.57□□□□□ -1.36
SSR2-202ENST00000368311 C12orf57Q99622 126 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 WDR83OSQ9Y284 106 aa6.57□□□□□ -1.36
SSR2-202ENST00000368311 EP300Q09472 2414 aaPredicted RBP6.56□□□□□ -1.36
SSR2-202ENST00000368311 ASXL3Q9C0F0 2248 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 IGHV3-66A0A0C4DH42 116 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 GGTLC3B5MD39 225 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 INS-IGF2F8WCM5 200 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 ARL14EPLP0DKL9 152 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 CDKN1BP46527 198 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 MRPL23Q16540 153 aaKnown RBP6.56□□□□□ -1.36
SSR2-202ENST00000368311 PIFOQ8TCI5 191 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 ST20Q9HBF5 79 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 C7orf71A4D174 169 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 HSBP1O75506 76 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 LBHQ53QV2 105 aaPredicted RBP6.56□□□□□ -1.36
SSR2-202ENST00000368311 ZNF841Q6ZN19 808 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 C11orf42Q8N5U0 333 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 RNF183Q96D59 192 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
SSR2-202ENST00000368311 CKS2P33552 79 aa6.56□□□□□ -1.36
SSR2-202ENST00000368311 RPS10P46783 165 aaKnown RBP6.56□□□□□ -1.36
SSR2-202ENST00000368311 TCTAP57738 103 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms