RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 C10orf55Q5SWW7 151 aa16.78■□□□□ 0.28
EDC4-201ENST00000358933 SLC25A39Q9BZJ4 359 aaPredicted RBP16.78■□□□□ 0.28
EDC4-201ENST00000358933 SPANXA1Q9NS26 97 aa16.78■□□□□ 0.28
EDC4-201ENST00000358933 RPUSD1Q9UJJ7 312 aaKnown RBP16.78■□□□□ 0.28
EDC4-201ENST00000358933 TSSC4Q9Y5U2 329 aaPredicted RBP16.78■□□□□ 0.28
EDC4-201ENST00000358933 SPTBN1Q01082 2364 aaKnown RBP16.78■□□□□ 0.28
EDC4-201ENST00000358933 IGKV3OR2-268A0A0C4DH90 116 aa16.78■□□□□ 0.28
EDC4-201ENST00000358933 CNTFRP26992 372 aa16.78■□□□□ 0.28
EDC4-201ENST00000358933 GFRA4Q9GZZ7 299 aa16.78■□□□□ 0.28
EDC4-201ENST00000358933 RNASE4P34096 147 aaKnown RBP16.77■□□□□ 0.28
EDC4-201ENST00000358933 TRAV21A0A0B4J279 112 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 CCL21O00585 134 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 LINC00479Q96M42 142 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 TRGV9Q99603 122 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 WNK2Q9Y3S1 2297 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 SPAARA0A1B0GVQ0 90 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 TMEM238C9JI98 176 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 NBR2O15453 112 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 TOMM40O96008 361 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 CACNA1EQ15878 2313 aa16.77■□□□□ 0.28
EDC4-201ENST00000358933 PLAURQ03405 335 aa16.77■□□□□ 0.27
EDC4-201ENST00000358933 Q6P435 159 aa16.77■□□□□ 0.27
EDC4-201ENST00000358933 LHFPL4Q7Z7J7 247 aa16.77■□□□□ 0.27
EDC4-201ENST00000358933 FANCMQ8IYD8 2048 aa16.77■□□□□ 0.27
EDC4-201ENST00000358933 SRRM5B3KS81 715 aa16.76■□□□□ 0.27
EDC4-201ENST00000358933 SCRT1Q9BWW7 348 aa16.76■□□□□ 0.27
EDC4-201ENST00000358933 K7EP34 96 aa16.76■□□□□ 0.27
EDC4-201ENST00000358933 FOXG1P55316 489 aaPredicted RBP16.76■□□□□ 0.27
EDC4-201ENST00000358933 ATP1A1-AS1Q5TC04 95 aa16.76■□□□□ 0.27
EDC4-201ENST00000358933 CLEC19AQ6UXS0 136 aa16.76■□□□□ 0.27
EDC4-201ENST00000358933 CASP8AP2Q9UKL3 1982 aa16.76■□□□□ 0.27
EDC4-201ENST00000358933 RHOGP84095 191 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 CYYR1Q96J86 154 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 IGKV1-6A0A0C4DH72 117 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 ANK1P16157 1881 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 M0R2P5 195 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 ETDBQ3ZM63 59 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 ARTNQ5T4W7 220 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 C20orf204Q6ZNR8 217 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 ZNF329Q86UD4 541 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 TMEM158Q8WZ71 300 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 TMEM133Q9H2Q1 129 aa16.75■□□□□ 0.27
EDC4-201ENST00000358933 C17orf100A8MU93 164 aa16.74■□□□□ 0.27
EDC4-201ENST00000358933 SLC25A15Q9Y619 301 aa16.74■□□□□ 0.27
EDC4-201ENST00000358933 V9GYV3 84 aa16.74■□□□□ 0.27
EDC4-201ENST00000358933 AMN1Q8IY45 258 aa16.74■□□□□ 0.27
EDC4-201ENST00000358933 TMEM101Q96IK0 257 aa16.74■□□□□ 0.27
EDC4-201ENST00000358933 COX8AP10176 69 aa16.73■□□□□ 0.27
EDC4-201ENST00000358933 TMPRSS3P57727 454 aa16.73■□□□□ 0.27
EDC4-201ENST00000358933 FAM27E3Q08E93 113 aa16.73■□□□□ 0.27
EDC4-201ENST00000358933 SPAG8Q99932 426 aaPredicted RBP16.73■□□□□ 0.27
EDC4-201ENST00000358933 GGNQ86UU5 652 aa16.73■□□□□ 0.27
EDC4-201ENST00000358933 C2orf82Q6UX34 121 aa16.73■□□□□ 0.27
EDC4-201ENST00000358933 CRIPAKQ8N1N5 446 aa16.73■□□□□ 0.27
EDC4-201ENST00000358933 IGKV2-40A0A087WW87 121 aaPredicted RBP16.72■□□□□ 0.27
EDC4-201ENST00000358933 RBMY1BA6NDE4 496 aaKnown RBP16.72■□□□□ 0.27
EDC4-201ENST00000358933 RBMY1EA6NEQ0 496 aaKnown RBP16.72■□□□□ 0.27
EDC4-201ENST00000358933 IGKV2D-40P01614 121 aaPredicted RBP16.72■□□□□ 0.27
EDC4-201ENST00000358933 RBMY1DP0C7P1 496 aaKnown RBP16.72■□□□□ 0.27
EDC4-201ENST00000358933 RBMY1A1P0DJD3 496 aaKnown RBP16.72■□□□□ 0.27
EDC4-201ENST00000358933 RBMY1CP0DJD4 496 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 APOBEC3AP31941 199 aaPredicted RBP16.72■□□□□ 0.27
EDC4-201ENST00000358933 FOXL2NBQ6ZUU3 175 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 TMEM167AQ8TBQ9 72 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 SLAQ13239 276 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 ATP6V0BQ99437 205 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 PTPRDP23468 1912 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 ZNF114Q8NC26 417 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 F8W1H4 67 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 CT83Q5H943 113 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 BVES-AS1Q5T3Y7 98 aa16.72■□□□□ 0.27
EDC4-201ENST00000358933 PHF3Q92576 2039 aaKnown RBP16.71■□□□□ 0.27
EDC4-201ENST00000358933 LINC00205P59089 165 aa16.71■□□□□ 0.27
EDC4-201ENST00000358933 CD7P09564 240 aa16.71■□□□□ 0.27
EDC4-201ENST00000358933 DUX5Q96PT3 197 aa16.71■□□□□ 0.27
EDC4-201ENST00000358933 TOMM7Q9P0U1 55 aa16.71■□□□□ 0.27
EDC4-201ENST00000358933 E9PLN8 166 aa16.71■□□□□ 0.27
EDC4-201ENST00000358933 MYOD1P15172 320 aa16.71■□□□□ 0.26
EDC4-201ENST00000358933 ZNF562Q6V9R5 426 aa16.71■□□□□ 0.26
EDC4-201ENST00000358933 SH2D1AO60880 128 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 ARMS2P0C7Q2 107 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 PRB4P10163 310 aaPredicted RBP16.7■□□□□ 0.26
EDC4-201ENST00000358933 LYPD1Q8N2G4 141 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 ROS1P08922 2347 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 UNQ6494/PRO21346Q6UXR6 183 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 Q86TA4 180 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 ZNF492Q9P255 531 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 LY6EQ16553 131 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 PYGO2Q9BRQ0 406 aa16.7■□□□□ 0.26
EDC4-201ENST00000358933 GAGE12HA6NDE8 117 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 TNFRSF6BO95407 300 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 VDAC2P45880 294 aaPredicted RBP16.69■□□□□ 0.26
EDC4-201ENST00000358933 FDCSPQ8NFU4 85 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 ABCA7Q8IZY2 2146 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 RNASE2P10153 161 aaKnown RBP16.69■□□□□ 0.26
EDC4-201ENST00000358933 C9orf106Q8NAJ2 232 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 KLF12Q9Y4X4 402 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 FAM231DQ6ZW35 169 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 PLEKHB2Q96CS7 222 aa16.69■□□□□ 0.26
EDC4-201ENST00000358933 CD177Q8N6Q3 437 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms