RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 LINC00862A6NCI5 91 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 SAP30O75446 220 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 JTBO76095 146 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 CBLN1P23435 193 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 RPL29P47914 159 aaKnown RBP11.28□□□□□ -0.6
CCNE1-202ENST00000357943 B2MP61769 119 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 ALKAL2Q6UX46 152 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 BAP18Q8IXM2 172 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 PHYHIPLQ96FC7 376 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 ELOVL1Q9BW60 279 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 DOK5Q9P104 306 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 SELENOKQ9Y6D0 94 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 NOTCH3Q9UM47 2321 aa11.28□□□□□ -0.6
CCNE1-202ENST00000357943 EIF5AP63241 154 aaKnown RBP11.27□□□□□ -0.6
CCNE1-202ENST00000357943 HSD17B11Q8NBQ5 300 aa11.27□□□□□ -0.6
CCNE1-202ENST00000357943 OR1B1Q8NGR6 318 aa11.27□□□□□ -0.6
CCNE1-202ENST00000357943 METTL26Q96S19 204 aa11.27□□□□□ -0.6
CCNE1-202ENST00000357943 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.6
CCNE1-202ENST00000357943 IGHV3-66A0A0C4DH42 116 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 IGHV7-4-1A0A0J9YVY3 117 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 C8orf88P0DMB2 117 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 NPPCP23582 126 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 CRYBB3P26998 211 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 PLP1P60201 277 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 ZNF709Q8N972 641 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 ARV1Q9H2C2 271 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.61
CCNE1-202ENST00000357943 RABAC1Q9UI14 185 aa11.27□□□□□ -0.61
CCNE1-202ENST00000357943 BORCS7-ASMTA0A0B4J1R7 106 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 C17orf112F2Z3M2 114 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 ATP6V0CP27449 155 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 OXLD1Q5BKU9 147 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 PATE2Q6UY27 113 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 Q6ZRG5 221 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
CCNE1-202ENST00000357943 RHPN1-AS1Q9BWJ2 59 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 MLXQ9UH92 298 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 SMPXQ9UHP9 88 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 DNAH3Q8TD57 4116 aa11.26□□□□□ -0.61
CCNE1-202ENST00000357943 CHEK1O14757 476 aa11.25□□□□□ -0.61
CCNE1-202ENST00000357943 GCSAMLQ5JQS6 135 aa11.25□□□□□ -0.61
CCNE1-202ENST00000357943 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
CCNE1-202ENST00000357943 MARC2Q969Z3 335 aa11.25□□□□□ -0.61
CCNE1-202ENST00000357943 UHRF2Q96PU4 802 aa11.25□□□□□ -0.61
CCNE1-202ENST00000357943 SH3BGRL3Q9H299 93 aa11.25□□□□□ -0.61
CCNE1-202ENST00000357943 U3KQE9 123 aa11.25□□□□□ -0.61
CCNE1-202ENST00000357943 HYPMO75409 117 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 OR5G3P0C626 314 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 RNF2Q99496 336 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 BUB3O43684 328 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 RAB14P61106 215 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 CLLU1Q5K131 121 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 VSIRQ9H7M9 311 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 KCNIP2Q9NS61 270 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 HIGD1AQ9Y241 93 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
CCNE1-202ENST00000357943 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 G3V4G9 280 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 IGLV1-51P01701 117 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 INSL3P51460 131 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 DEFB114Q30KQ6 69 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
CCNE1-202ENST00000357943 FFAR4Q5NUL3 377 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 FAM74A1Q5RGS3 127 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 LEMD1Q68G75 181 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 LINC00305Q7Z4B0 112 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 TMED6Q8WW62 240 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 NARS2Q96I59 477 aaKnown RBP11.23□□□□□ -0.61
CCNE1-202ENST00000357943 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
CCNE1-202ENST00000357943 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
CCNE1-202ENST00000357943 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
CCNE1-202ENST00000357943 A0A1W2PS18 150 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 ZNF98A6NK75 572 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 SPP1P10451 314 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 MORN5Q5VZ52 161 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 C10orf113Q5VZT2 155 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 EIF5AL1Q6IS14 154 aaKnown RBP11.22□□□□□ -0.61
CCNE1-202ENST00000357943 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 PCNPQ8WW12 178 aaKnown RBP11.22□□□□□ -0.61
CCNE1-202ENST00000357943 CITED4Q96RK1 184 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 PSMG3Q9BT73 122 aaPredicted RBP11.22□□□□□ -0.61
CCNE1-202ENST00000357943 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
CCNE1-202ENST00000357943 IZUMO1RA6ND01 250 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 H3BRN7 92 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 WIPF1O43516 503 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 NMBP08949 121 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 SEC11BP0C7V7 166 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 GNPNAT1Q96EK6 184 aaPredicted RBP11.21□□□□□ -0.61
CCNE1-202ENST00000357943 PFDN5Q99471 154 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 SHANK2-AS3Q9BTD1 123 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 SLC25A22Q9H936 323 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms