RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ACTL10Q5JWF8 245 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 SDF2L1Q9HCN8 221 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 TMEM14CQ9P0S9 112 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 FAM159AQ6UWV7 190 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 SEPSECSQ9HD40 501 aaKnown RBP7.11□□□□□ -1.27
UPF2-202ENST00000357604 MLXQ9UH92 298 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 TMEM189A5PLL7 270 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 C11orf94C9JXX5 98 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 CHEK1O14757 476 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 ARL14EPLP0DKL9 152 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 DEFB131AP59861 70 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 AARDQ4LEZ3 155 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 UTF1Q5T230 341 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 ALKAL2Q6UX46 152 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
UPF2-202ENST00000357604 PPP1R2P9O14990 202 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 PPIFP30405 207 aaKnown RBP7.1□□□□□ -1.27
UPF2-202ENST00000357604 CEP295Q9C0D2 2601 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 PSG3Q16557 428 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 PRNTQ86SH4 94 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 Q9H3A6 140 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 TIMM8BQ9Y5J9 83 aaPredicted RBP7.1□□□□□ -1.27
UPF2-202ENST00000357604 ZNF462Q96JM2 2506 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 CDH23Q9H251 3354 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 MFAP2P55001 183 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 FAM74A3Q4VXF1 159 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 RNF152Q8N8N0 203 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 SPATA25Q9BR10 227 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 VAX2Q9UIW0 290 aa7.1□□□□□ -1.27
UPF2-202ENST00000357604 YLPM1P49750 1951 aaKnown RBP7.1□□□□□ -1.27
UPF2-202ENST00000357604 LINC01548A6NM66 108 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 SMAGPQ0VAQ4 97 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 ANKHD1Q8IWZ3 2542 aaKnown RBP7.09□□□□□ -1.27
UPF2-202ENST00000357604 A8MWP6 167 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 ICAM4Q14773 271 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 WI2-2373I1.2A0A1W2PRP0 233 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 CTSGP08311 255 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 P0C879 139 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 HAGHQ16775 308 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 SMUG1Q53HV7 270 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
UPF2-202ENST00000357604 CA1P00915 261 aaPredicted RBP7.09□□□□□ -1.28
UPF2-202ENST00000357604 MIR17HGQ75NE6 70 aa7.09□□□□□ -1.28
UPF2-202ENST00000357604 CYB561D1Q8N8Q1 229 aa7.09□□□□□ -1.28
UPF2-202ENST00000357604 WIPF2Q8TF74 440 aaPredicted RBP7.09□□□□□ -1.28
UPF2-202ENST00000357604 ST6GAL2Q96JF0 529 aa7.09□□□□□ -1.28
UPF2-202ENST00000357604 FANCD2OSQ96PS1 177 aa7.09□□□□□ -1.28
UPF2-202ENST00000357604 CBY3A6NI87 242 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 I3L521 148 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 ZNF688P0C7X2 276 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 HTN1P15515 57 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 FGF8P55075 233 aaPredicted RBP7.08□□□□□ -1.28
UPF2-202ENST00000357604 CFHR3Q02985 330 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 MS4A6AQ9H2W1 248 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 CHD3Q12873 2000 aaKnown RBP7.08□□□□□ -1.28
UPF2-202ENST00000357604 SZT2Q5T011 3432 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 CGB1A6NKQ9 187 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 J3KRW8 73 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 CD300EQ496F6 205 aaPredicted RBP7.08□□□□□ -1.28
UPF2-202ENST00000357604 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 SCRT1Q9BWW7 348 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 ORM1P02763 201 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 CRYBB3P26998 211 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 LINC00482Q8N8I6 264 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 TPPP3Q9BW30 176 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 GATA2P23769 480 aaPredicted RBP7.08□□□□□ -1.28
UPF2-202ENST00000357604 RNASE4P34096 147 aaKnown RBP7.08□□□□□ -1.28
UPF2-202ENST00000357604 KRTAP21-3Q3LHN1 58 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 TMEM256Q8N2U0 113 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 RNF126Q9BV68 326 aa7.08□□□□□ -1.28
UPF2-202ENST00000357604 TRAV21A0A0B4J279 112 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 IGKV3-20P01619 116 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 EGR2P11161 476 aaPredicted RBP7.07□□□□□ -1.28
UPF2-202ENST00000357604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 COMMD7Q86VX2 200 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 RAB24Q969Q5 203 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 SULT1A2P50226 295 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 TOR2AQ5JU69 321 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 ASCL2Q99929 193 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 RFNGQ9Y644 331 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 ARL2-SNX15V9GYD0 113 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 BOLA2-SMG1P6H3BVE0 249 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 ZNF253O75346 499 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 PROP1O75360 226 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 P01737 135 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 NKX2-5P52952 324 aaPredicted RBP7.07□□□□□ -1.28
UPF2-202ENST00000357604 SOHLH1Q5JUK2 328 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 SIGLEC8Q9NYZ4 499 aa7.07□□□□□ -1.28
UPF2-202ENST00000357604 PAGE4O60829 102 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 VWC2Q2TAL6 325 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 ASPHD1Q5U4P2 390 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 TMPRSS5Q9H3S3 457 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 ASIPP42127 132 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 ZNF680Q8NEM1 530 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 SMDT1Q9H4I9 107 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 NHLRC4P0CG21 123 aaPredicted RBP7.06□□□□□ -1.28
UPF2-202ENST00000357604 SUMO1P63165 101 aaKnown RBP7.06□□□□□ -1.28
UPF2-202ENST00000357604 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 KLK5Q9Y337 293 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms