RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SAP30O75446 220 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 C1QBP02746 253 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 HSPB1P04792 205 aaKnown RBP3.06□□□□□ -1.92
LIG4-201ENST00000356922 GPX4P36969 197 aaPredicted RBP3.06□□□□□ -1.92
LIG4-201ENST00000356922 LYZP61626 148 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 ZNF616Q08AN1 781 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 GUCA2BQ16661 112 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 MIC13Q5XKP0 118 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 C9orf62Q8N4C0 152 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 LINC00482Q8N8I6 264 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 ZNF680Q8NEM1 530 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 ZNF471Q9BX82 626 aaPredicted RBP3.06□□□□□ -1.92
LIG4-201ENST00000356922 ARL6Q9H0F7 186 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 DOK5Q9P104 306 aa3.06□□□□□ -1.92
LIG4-201ENST00000356922 TMEM213A2RRL7 107 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 RD3LP0DJH9 198 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 S100PP25815 95 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 S100A11P31949 105 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 FCGR2BP31994 310 aaPredicted RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 RBPMS2Q6ZRY4 209 aaKnown RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 TMEM144Q7Z5S9 345 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 S100A7AQ86SG5 101 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 BPIFCQ8NFQ6 507 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 GINS3Q9BRX5 216 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 SLC25A22Q9H936 323 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 NPVFQ9HCQ7 196 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 BIN3Q9NQY0 253 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 UQCC1Q9NVA1 299 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 WDR83OSQ9Y284 106 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 HUWE1Q7Z6Z7 4374 aaKnown RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 LINC00862A6NCI5 91 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 C17orf112F2Z3M2 114 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 LINC01619G3V211 115 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 DNASE2O00115 360 aaPredicted RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 GGCTO75223 188 aaKnown RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 SCAF4O95104 1147 aaKnown RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 CFDP00746 253 aaPredicted RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 IFNA7P01567 189 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 IGLL1P15814 213 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 S100A7P31151 101 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 BMI1P35226 326 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 TFPI2P48307 235 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 KRTAP21-3Q3LHN1 58 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 SPATA31B1PQ5VZV4 182 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 BTNL8Q6UX41 500 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 SSX7Q7RTT5 188 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 WFDC3Q8IUB2 231 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 THAP8Q8NA92 274 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 HSD17B11Q8NBQ5 300 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 OR1B1Q8NGR6 318 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 GGTLC1Q9BX51 225 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 PEMTQ9UBM1 199 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 SLC45A2Q9UMX9 530 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 STAB2Q8WWQ8 2551 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 TRAV30A0A087WSZ9 112 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 TRAV5A0A0B4J249 113 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 HMSDA8MTL9 139 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 DFFBO76075 338 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 FGF7P21781 194 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 FHITP49789 147 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 PRR20EP86478 221 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 PRR20CP86479 221 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 PRR20DP86480 221 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 PRR20BP86481 221 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 PRR20AP86496 221 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 KCNRGQ8N5I3 272 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 CLRN3Q8NCR9 226 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 OR51G1Q8NGK1 321 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 GRAMD2BQ96HH9 432 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 NPCDR1Q9BY65 106 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 WDR61Q9GZS3 305 aaKnown RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 SEPSECSQ9HD40 501 aaKnown RBP3.05□□□□□ -1.92
LIG4-201ENST00000356922 AGRNO00468 2067 aa3.05□□□□□ -1.92
LIG4-201ENST00000356922 A0A1W2PPV4 95 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 G3V4G9 280 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 COX7A2P2O60397 106 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 PRB2P02812 416 aaPredicted RBP3.04□□□□□ -1.92
LIG4-201ENST00000356922 IL4P05112 153 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 CSN3P07498 182 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 NPPCP23582 126 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 CAMLGP49069 296 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 DLK1P80370 383 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 DEFA6Q01524 100 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 TEPPQ6URK8 271 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 TMUB2Q71RG4 321 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 GPHB5Q86YW7 130 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 C1QL4Q86Z23 238 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 WFDC9Q8NEX5 89 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 METTL26Q96S19 204 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 TMEM147Q9BVK8 224 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 RABAC1Q9UI14 185 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 WI2-2373I1.2A0A1W2PRP0 233 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 CBLN1P23435 193 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 ATP6V0CP27449 155 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 ELLP55199 621 aaPredicted RBP3.04□□□□□ -1.92
LIG4-201ENST00000356922 ATP5IP56385 69 aaPredicted RBP3.04□□□□□ -1.92
LIG4-201ENST00000356922 EIF5AP63241 154 aaKnown RBP3.04□□□□□ -1.92
LIG4-201ENST00000356922 ZNF266Q14584 549 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 OR9G4Q8NGQ1 327 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms