RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 AMTNQ6UX39 209 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 C19orf35Q6ZS72 473 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 C1orf122Q6ZSJ8 110 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 LCNL1Q6ZST4 164 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 NEGR1Q7Z3B1 354 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 BPIFA4PQ86YQ2 179 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 FAM216BQ8N7L0 139 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 OR13A1Q8NGR1 328 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 ARPC1AQ92747 370 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 ROS1P08922 2347 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 C2orf70A6NJV1 201 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 C12orf77C9JDV5 145 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 J3QKU1 62 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 K7EP34 96 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 LINC00205P59089 165 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 TMEM97Q5BJF2 176 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 C3orf56Q8N813 242 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 LINC00574Q9H8X3 128 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 ST20Q9HBF5 79 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 YTHDF2Q9Y5A9 579 aaKnown RBP8.16□□□□□ -1.1
SYNE1-203ENST00000354674 FOXH1O75593 365 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 LINC00869P0C866 280 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 ZNF137PP52743 207 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 PSG3Q16557 428 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 LYPD2Q6UXB3 125 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 TPRX1Q8N7U7 411 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 RAB40CQ96S21 281 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 PSMG3Q9BT73 122 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-203ENST00000354674 CTSZQ9UBR2 303 aa8.16□□□□□ -1.1
SYNE1-203ENST00000354674 TMPRSS2O15393 492 aa8.15□□□□□ -1.1
SYNE1-203ENST00000354674 EFNA4P52798 201 aa8.15□□□□□ -1.1
SYNE1-203ENST00000354674 FXYD7P58549 80 aa8.15□□□□□ -1.1
SYNE1-203ENST00000354674 RPS20P60866 119 aaKnown RBP8.15□□□□□ -1.1
SYNE1-203ENST00000354674 CD300EQ496F6 205 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-203ENST00000354674 KCNIP1Q9NZI2 227 aa8.15□□□□□ -1.1
SYNE1-203ENST00000354674 PSG11Q9UQ72 335 aa8.15□□□□□ -1.1
SYNE1-203ENST00000354674 BRI3O95415 125 aa8.15□□□□□ -1.11
SYNE1-203ENST00000354674 HLA-DRB1P01911 266 aa8.15□□□□□ -1.11
SYNE1-203ENST00000354674 COX6B1P14854 86 aa8.15□□□□□ -1.11
SYNE1-203ENST00000354674 ZNF816Q0VGE8 651 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-203ENST00000354674 FAM53AQ6NSI3 398 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-203ENST00000354674 COMMD5Q9GZQ3 224 aa8.15□□□□□ -1.11
SYNE1-203ENST00000354674 ZNF331Q9NQX6 463 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-203ENST00000354674 TNFRSF19Q9NS68 423 aa8.15□□□□□ -1.11
SYNE1-203ENST00000354674 PKDREJQ9NTG1 2253 aa8.15□□□□□ -1.11
SYNE1-203ENST00000354674 LY6HO94772 140 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 IGKV1-39P01597 117 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 HBZP02008 142 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 IGKV1D-39P04432 117 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 CRYBB3P26998 211 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 FCGR2BP31994 310 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-203ENST00000354674 EDDM3AQ14507 147 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 TMEM155Q4W5P6 130 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 SFTA2Q6UW10 78 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 LINC00479Q96M42 142 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 DCTN5Q9BTE1 182 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 NPCDR1Q9BY65 106 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 SLC25A10Q9UBX3 287 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-203ENST00000354674 MYO18BQ8IUG5 2567 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 IGKV1-5P01602 117 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 GALMQ96C23 342 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 C20orf78Q9BR46 151 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 OR2W1Q9Y3N9 320 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 ABCA4P78363 2273 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 F2RP25116 425 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 G6PCP35575 357 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 C17orf58Q2M2W7 97 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 CENPWQ5EE01 88 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 FGFRL1Q8N441 504 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 GNB1LQ9BYB4 327 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 ZNF355PQ9NSJ1 428 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 PSG8Q9UQ74 426 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 V9GYV3 84 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 DSCAML1Q8TD84 2053 aa8.14□□□□□ -1.11
SYNE1-203ENST00000354674 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 NDUFS7O75251 213 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 OR10J3Q5JRS4 329 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 MIC13Q5XKP0 118 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 RAB1CQ92928 201 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 LINC00312Q9Y6C7 94 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 KBTBD11-OT1A0A1B0GTJ5 212 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 A1L4Q6 167 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 NDUFB3O43676 98 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 LEPROTL1O95214 131 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 VSTM2AQ8TAG5 236 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 RABAC1Q9UI14 185 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 ABCA1O95477 2261 aa8.13□□□□□ -1.11
SYNE1-203ENST00000354674 SYS1-DBNDD2H3BUS1 97 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 SPINT2O43291 252 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 GNG4P50150 75 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 LOXL3P58215 753 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 GDF5OSQ5U4N7 250 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 TIMD4Q96H15 378 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 EAF1Q96JC9 268 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-203ENST00000354674 SPAG8Q99932 426 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-203ENST00000354674 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 CALYQ9NYX4 217 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 UTP20O75691 2785 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms