RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 B9A039 149 aa13.24□□□□□ -0.29
PDAP1-201ENST00000350498 IGLV1-47P01700 117 aa13.24□□□□□ -0.29
PDAP1-201ENST00000350498 PNKDQ8N490 385 aa13.24□□□□□ -0.29
PDAP1-201ENST00000350498 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
PDAP1-201ENST00000350498 ASCL2Q99929 193 aa13.24□□□□□ -0.29
PDAP1-201ENST00000350498 INSIG2Q9Y5U4 225 aa13.24□□□□□ -0.29
PDAP1-201ENST00000350498 IGHV1-3A0A0C4DH29 117 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 HYPMO75409 117 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 TOX4O94842 621 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 ZNF137PP52743 207 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 VMA21Q3ZAQ7 101 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 SPATA12Q7Z6I5 190 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 STPG4Q8N801 248 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 MBD6Q96DN6 1003 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 SPTAN1Q13813 2472 aaKnown RBP13.23□□□□□ -0.29
PDAP1-201ENST00000350498 PPIAL4CA0A0B4J2A2 164 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 BUB1B-PAK6H3BSN5 160 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 PPIAL4GP0DN37 164 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 ZNF672Q499Z4 452 aaPredicted RBP13.23□□□□□ -0.29
PDAP1-201ENST00000350498 GOLT1BQ9Y3E0 138 aa13.23□□□□□ -0.29
PDAP1-201ENST00000350498 RBPJQ06330 500 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 ONECUT1Q9UBC0 465 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 SIGLEC9Q9Y336 463 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 S4R3C0 116 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 IGLC2P0DOY2 106 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 IGLC3P0DOY3 106 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 PRRX1P54821 245 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 FOXA3P55318 350 aaPredicted RBP13.22□□□□□ -0.29
PDAP1-201ENST00000350498 KLRD1Q13241 179 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 OR4B1Q8NGF8 309 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 OR2D3Q8NGH3 330 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 MRPL32Q9BYC8 188 aaKnown RBP13.22□□□□□ -0.29
PDAP1-201ENST00000350498 TNFRSF19Q9NS68 423 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 HIVEP3Q5T1R4 2406 aa13.22□□□□□ -0.29
PDAP1-201ENST00000350498 M0QZK8 103 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 ARF6P62330 175 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 Q56UQ5 140 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 RNASEKQ6P5S7 137 aaKnown RBP13.21□□□□□ -0.29
PDAP1-201ENST00000350498 Q6ZN92 141 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 TXN2Q99757 166 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 C19orf24Q9BVV8 132 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 CLEC5AQ9NY25 188 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 HILPDAQ9Y5L2 63 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 PGPA6NDG6 321 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 SLC25A5P05141 298 aaKnown RBP13.21□□□□□ -0.29
PDAP1-201ENST00000350498 CRYGBP07316 175 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 RPL27AP46776 148 aaKnown RBP13.21□□□□□ -0.29
PDAP1-201ENST00000350498 ADORA2A-AS1P86434 159 aa13.21□□□□□ -0.29
PDAP1-201ENST00000350498 MC5RP33032 325 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 C8orf31Q8N9H6 132 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 OR4A5Q8NH83 315 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 COL25A1Q9BXS0 654 aaPredicted RBP13.2□□□□□ -0.3
PDAP1-201ENST00000350498 C7orf69Q9H7B7 122 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 TRAV8-1A0A0A6YYK1 113 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 INS-IGF2F8WCM5 200 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 BORCS7Q96B45 105 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 URB1-AS1Q96HZ7 61 aa13.2□□□□□ -0.3
PDAP1-201ENST00000350498 TEX22C9J3V5 150 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 HSBP1O75506 76 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 RPL19P84098 196 aaKnown RBP13.19□□□□□ -0.3
PDAP1-201ENST00000350498 KLF17Q5JT82 389 aaPredicted RBP13.19□□□□□ -0.3
PDAP1-201ENST00000350498 THAP8Q8NA92 274 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 M0R2Z0 102 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 NDUFB8O95169 186 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 CA7P43166 264 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 LGALS7P47929 136 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDAP1-201ENST00000350498 ATP5IP56385 69 aaPredicted RBP13.19□□□□□ -0.3
PDAP1-201ENST00000350498 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 FAM71F2Q6NXP2 309 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 LINC00173Q6ZV60 143 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 PPP1R27Q86WC6 154 aa13.19□□□□□ -0.3
PDAP1-201ENST00000350498 UBE2G1P62253 170 aa13.18□□□□□ -0.3
PDAP1-201ENST00000350498 GRAMD2BQ96HH9 432 aa13.18□□□□□ -0.3
PDAP1-201ENST00000350498 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
PDAP1-201ENST00000350498 EPDR1Q9UM22 224 aa13.18□□□□□ -0.3
PDAP1-201ENST00000350498 MYCNOSP40205 109 aa13.18□□□□□ -0.3
PDAP1-201ENST00000350498 HINT1P49773 126 aaPredicted RBP13.18□□□□□ -0.3
PDAP1-201ENST00000350498 GTSF1Q8WW33 167 aa13.18□□□□□ -0.3
PDAP1-201ENST00000350498 RPEQ96AT9 228 aa13.18□□□□□ -0.3
PDAP1-201ENST00000350498 MCRIP2Q9BUT9 160 aaKnown RBP13.18□□□□□ -0.3
PDAP1-201ENST00000350498 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 TIMM23O14925 209 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 NDUFS7O75251 213 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 CRYGCP07315 174 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 OR1L4Q8NGR5 311 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 PGLYRP4Q96LB8 373 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 HNRNPA3P51991 378 aaKnown RBP13.17□□□□□ -0.3
PDAP1-201ENST00000350498 ZNF138P52744 262 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 BPIFB3P59826 476 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
PDAP1-201ENST00000350498 PLGLAQ15195 96 aa13.16□□□□□ -0.3
PDAP1-201ENST00000350498 BCL6BQ8N143 479 aaPredicted RBP13.16□□□□□ -0.3
PDAP1-201ENST00000350498 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
PDAP1-201ENST00000350498 UQCR10Q9UDW1 63 aa13.16□□□□□ -0.3
PDAP1-201ENST00000350498 A0A1W2PPR1 153 aa13.16□□□□□ -0.3
PDAP1-201ENST00000350498 NBEAP1P0C6P0 100 aa13.16□□□□□ -0.3
PDAP1-201ENST00000350498 FAM231DQ6ZW35 169 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms