RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TRBV20OR9-2A0A075B6H5 130 aa9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 MBNL2Q5VZF2 373 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 C17orf98A8MV24 154 aa9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 CD24P25063 80 aa9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 RPRMLQ8N4K4 120 aa9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 RNF125Q96EQ8 232 aa9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 FOXA2Q9Y261 457 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-202ENST00000348513 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 SH2D6Q7Z4S9 175 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 ATP6V0E2Q8NHE4 81 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 ZDBF2Q9HCK1 2354 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 PEX7O00628 323 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 CACNG8Q8WXS5 425 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 SPRR3Q9UBC9 169 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 GREB1LQ9C091 1923 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 A0A087WV48 116 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 EFEMP2O95967 443 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 CCL3L1P16619 93 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 UTF1Q5T230 341 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 C1orf195Q5TG92 126 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 SPACA3Q8IXA5 215 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 NABP1Q96AH0 204 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 LY96Q9Y6Y9 160 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 C9JCJ5 164 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 M0R2P5 195 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 NPIPB13A6NJU9 1138 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 NPIPB4C9JG80 1138 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 IGHV3-11P01762 117 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 VKORC1Q9BQB6 163 aa9.18□□□□□ -0.94
SMARCE1-202ENST00000348513 GGTLC3B5MD39 225 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 NDUFV3P56181 108 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 SYNJ2BPP57105 145 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 RBM3P98179 157 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 SCN5AQ14524 2016 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 RBMY1BA6NDE4 496 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 RBMY1EA6NEQ0 496 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 NAPSAO96009 420 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 RBMY1DP0C7P1 496 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 RBMY1A1P0DJD3 496 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 RBMY1CP0DJD4 496 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 RBMY1FQ15415 496 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 FLVCR1-AS1Q8TAF5 88 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 DPM3Q9P2X0 92 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 LOC285556D6RIA3 1793 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 YPEL3P61236 119 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 CFHR1Q03591 330 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 FOXI1Q12951 378 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 CD59P13987 128 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 SNRPD3P62318 126 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 C20orf173Q96LM9 149 aa9.17□□□□□ -0.94
SMARCE1-202ENST00000348513 TAL2Q16559 108 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 CLEC19AQ6UXS0 136 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 LCNL1Q6ZST4 164 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 ITLN2Q8WWU7 325 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 C17orf100A8MU93 164 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 NEU4Q8WWR8 484 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 SNRNP200O75643 2136 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 K7ERJ3 54 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 C3orf56Q8N813 242 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 LSM4Q9Y4Z0 139 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 SPSB3Q6PJ21 355 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 CRIPAKQ8N1N5 446 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 C1orf162Q8NEQ5 155 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 TMEM243Q9BU79 118 aa9.16□□□□□ -0.94
SMARCE1-202ENST00000348513 SLC25A20O43772 301 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 LRRC75A-AS1Q8N1F1 130 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 NUP35Q8NFH5 326 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 SLC25A15Q9Y619 301 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 LCTP09848 1927 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 CRYGCP07315 174 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 PLNP26678 52 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 CD69Q07108 199 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 ZFP36L1Q07352 338 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 FOXF2Q12947 444 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 LINC00114Q6XXX2 140 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 DUX3Q96PT4 197 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 LTBP1Q14766 1721 aa9.15□□□□□ -0.94
SMARCE1-202ENST00000348513 CACNA1GO43497 2377 aa9.15□□□□□ -0.95
SMARCE1-202ENST00000348513 ATOX1O00244 68 aa9.15□□□□□ -0.95
SMARCE1-202ENST00000348513 IGHG4P01861 327 aa9.15□□□□□ -0.95
SMARCE1-202ENST00000348513 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.95
SMARCE1-202ENST00000348513 GATA2P23769 480 aaPredicted RBP9.15□□□□□ -0.95
SMARCE1-202ENST00000348513 Q6ZUT4 128 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 RNASE6Q93091 150 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 GREB1Q4ZG55 1949 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 CACNA1EQ15878 2313 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 IQCF6A8MYZ5 107 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 NPFFO15130 113 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 C11orf44Q8N8P7 122 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 IGLV3-12A0A075B6K2 115 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 FGFBP3Q8TAT2 258 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 LYZL4Q96KX0 146 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms