RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ACOT6Q3I5F7 207 aaPredicted RBP14.48□□□□□ -0.09
CHMP4A-201ENST00000347519 FAM106AQ4KMX7 169 aa14.48□□□□□ -0.09
CHMP4A-201ENST00000347519 REC114Q7Z4M0 266 aa14.48□□□□□ -0.09
CHMP4A-201ENST00000347519 C1QL4Q86Z23 238 aa14.48□□□□□ -0.09
CHMP4A-201ENST00000347519 DNAJC4Q9NNZ3 241 aa14.48□□□□□ -0.09
CHMP4A-201ENST00000347519 WNK1Q9H4A3 2382 aa14.48□□□□□ -0.09
CHMP4A-201ENST00000347519 M6PRP20645 277 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 TMEM41BQ5BJD5 291 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 FAM122CQ6P4D5 195 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 SSX7Q7RTT5 188 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 RPP25LQ8N5L8 163 aaKnown RBP14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 ZNF680Q8NEM1 530 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 OR10G4Q8NGN3 311 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 OR10G9Q8NGN4 311 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 OR10G7Q8NGN6 311 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 PHYHIPLQ96FC7 376 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 IGHV3OR16-13A0A075B7E8 117 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 IGHV3-74A0A0B4J1X5 117 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 TRAV5A0A0B4J249 113 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 TMEM213A2RRL7 107 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 LGALS9O00182 355 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 SULT1A2P50226 295 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 ZNF726P1Q15940 193 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 AKR1C8PQ5T2L2 129 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 PXDC1Q5TGL8 231 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 C10orf113Q5VZT2 155 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 MIR17HGQ75NE6 70 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 OR1L4Q8NGR5 311 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 SCRT1Q9BWW7 348 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 SEPSECSQ9HD40 501 aaKnown RBP14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 RABAC1Q9UI14 185 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 HIGD1AQ9Y241 93 aa14.47□□□□□ -0.09
CHMP4A-201ENST00000347519 IGHV3-66A0A0C4DH42 116 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 FAM78BQ5VT40 261 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 LEMD1Q68G75 181 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 EIF5AL1Q6IS14 154 aaKnown RBP14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 SHISA2Q6UWI4 295 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 IL34Q6ZMJ4 242 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 ADAMTSL5Q6ZMM2 481 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 GATAD1Q8WUU5 269 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 SLC25A39Q9BZJ4 359 aaPredicted RBP14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 SELENOKQ9Y6D0 94 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 U3KQE9 123 aa14.46□□□□□ -0.1
CHMP4A-201ENST00000347519 CMYA5Q8N3K9 4069 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 ANK2Q01484 3957 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 A8MWP6 167 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 H3BRN7 92 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 K7EMT4 169 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 CRYBB3P26998 211 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 LINC00305Q7Z4B0 112 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 PFDN5Q99471 154 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 SLC25A22Q9H936 323 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 UFC1Q9Y3C8 167 aa14.45□□□□□ -0.1
CHMP4A-201ENST00000347519 ELOA3CA0A087WX78 387 aaPredicted RBP14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 SEC14L6B5MCN3 397 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 HMGB3O15347 200 aaKnown RBP14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 MBP02144 154 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 NPPCP23582 126 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 LINC00482Q8N8I6 264 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 OR9G4Q8NGQ1 327 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 FAM213BQ8TBF2 198 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 METTL26Q96S19 204 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 SHANK2-AS3Q9BTD1 123 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 DAZ1Q9NQZ3 744 aaKnown RBP14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 FUT9Q9Y231 359 aa14.44□□□□□ -0.1
CHMP4A-201ENST00000347519 IGHV7-4-1A0A0J9YVY3 117 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 C2orf70A6NJV1 201 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 ZNF98A6NK75 572 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 UMAD1C9J7I0 102 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 PF4P02776 101 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 OR4F17Q8NGA8 305 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 PCNPQ8WW12 178 aaKnown RBP14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 FAM167A-AS1Q96KT0 104 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 OR4F4Q96R69 305 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 SMPXQ9UHP9 88 aa14.43□□□□□ -0.1
CHMP4A-201ENST00000347519 OVOL1O14753 267 aa14.42□□□□□ -0.1
CHMP4A-201ENST00000347519 CSN3P07498 182 aa14.42□□□□□ -0.1
CHMP4A-201ENST00000347519 CDC34P49427 236 aaPredicted RBP14.42□□□□□ -0.1
CHMP4A-201ENST00000347519 RHOBP62745 196 aa14.42□□□□□ -0.1
CHMP4A-201ENST00000347519 RAB24Q969Q5 203 aa14.42□□□□□ -0.1
CHMP4A-201ENST00000347519 SLC25A2Q9BXI2 301 aa14.42□□□□□ -0.1
CHMP4A-201ENST00000347519 ACTR3CQ9C0K3 210 aaPredicted RBP14.42□□□□□ -0.1
CHMP4A-201ENST00000347519 BUB3O43684 328 aa14.41□□□□□ -0.1
CHMP4A-201ENST00000347519 IFNA7P01567 189 aa14.41□□□□□ -0.1
CHMP4A-201ENST00000347519 C8orf88P0DMB2 117 aa14.41□□□□□ -0.1
CHMP4A-201ENST00000347519 ZNF503Q96F45 646 aa14.41□□□□□ -0.1
CHMP4A-201ENST00000347519 MRPL32Q9BYC8 188 aaKnown RBP14.41□□□□□ -0.1
CHMP4A-201ENST00000347519 UBQLN2Q9UHD9 624 aa14.41□□□□□ -0.1
CHMP4A-201ENST00000347519 A0A1W2PPV4 95 aa14.4□□□□□ -0.1
CHMP4A-201ENST00000347519 CHEK1O14757 476 aa14.4□□□□□ -0.1
CHMP4A-201ENST00000347519 FOLR2P14207 255 aa14.4□□□□□ -0.1
CHMP4A-201ENST00000347519 CBLN1P23435 193 aa14.4□□□□□ -0.1
CHMP4A-201ENST00000347519 RAB5CP51148 216 aa14.4□□□□□ -0.1
CHMP4A-201ENST00000347519 RNF2Q99496 336 aa14.4□□□□□ -0.1
CHMP4A-201ENST00000347519 RHPN1-AS1Q9BWJ2 59 aa14.4□□□□□ -0.1
CHMP4A-201ENST00000347519 TRRAPQ9Y4A5 3859 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 VWFP04275 2813 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 CTXND1A0A1B0GTU2 59 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 ZNF705EA8MWA4 302 aaPredicted RBP14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 MRPS12O15235 138 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms