RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 ECSCRQ19T08 205 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 C10orf113Q5VZT2 155 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 UNQ5815/PRO19632Q6UWF5 114 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 SUN5Q8TC36 379 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 CD81P60033 236 aa10.49□□□□□ -0.73
HERPUD1-202ENST00000344114 AKIRIN2Q53H80 203 aa10.49□□□□□ -0.73
HERPUD1-202ENST00000344114 FAM90A2PQ658T7 463 aa10.49□□□□□ -0.73
HERPUD1-202ENST00000344114 TMEM37Q8WXS4 190 aa10.49□□□□□ -0.73
HERPUD1-202ENST00000344114 NIPSNAP3BQ9BS92 247 aa10.49□□□□□ -0.73
HERPUD1-202ENST00000344114 C11orf94C9JXX5 98 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 F6UZH7 168 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 PDE6DO43924 150 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 AMY1AP04745 511 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 CEBPGP53567 150 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 RHEBQ15382 184 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 FAM74A3Q4VXF1 159 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 OR5T1Q8NG75 326 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 VN1R17PQ8TDU5 208 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 OR4F4Q96R69 305 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 TXN2Q99757 166 aa10.48□□□□□ -0.73
HERPUD1-202ENST00000344114 OR7C2O60412 319 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 HYPMO75409 117 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 TOMM40O96008 361 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 BTN1A1Q13410 526 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 LY6EQ16553 131 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 TIGITQ495A1 244 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 PATE2Q6UY27 113 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 KLHDC1Q8N7A1 406 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 C21orf62Q9NYP8 219 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 DOK5Q9P104 306 aa10.47□□□□□ -0.73
HERPUD1-202ENST00000344114 H3BQ15 152 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 M0R036 132 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 GNG7O60262 68 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 OR2J3O76001 311 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 IGKV1-17P01599 117 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 IGHG2P01859 326 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 UBE2G2P60604 165 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 YPEL3P61236 119 aaPredicted RBP10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 C19orf54Q5BKX5 351 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 CST9LP1Q5W188 147 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 STXBP6Q8NFX7 210 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 OR5AU1Q8NGC0 362 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 TVP23CQ96ET8 276 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 FAM167A-AS1Q96KT0 104 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 SLC25A2Q9BXI2 301 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 ZNF355PQ9NSJ1 428 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 FBXL7Q9UJT9 491 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 PUS1Q9Y606 427 aaKnown RBP eCLIP10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 COL7A1Q02388 2944 aa10.46□□□□□ -0.74
HERPUD1-202ENST00000344114 TRBV9A0A0B4J1U6 114 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 TRAV41A0A0B4J266 112 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 FAM74A7A6NL05 159 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 DNASE2O00115 360 aaPredicted RBP10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 NDUFB8O95169 186 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 IGF1P05019 195 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 PSG1P11464 419 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 Q56UQ5 140 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 LINC00305Q7Z4B0 112 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 S100A7AQ86SG5 101 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 OR51G1Q8NGK1 321 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 ZNF503Q96F45 646 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 GAR1Q9NY12 217 aaKnown RBP10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 HIGD1AQ9Y241 93 aa10.45□□□□□ -0.74
HERPUD1-202ENST00000344114 NOTCH3Q9UM47 2321 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 SH2D7A6NKC9 451 aaPredicted RBP10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 ZNF727A8MUV8 499 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 H3BUA1 57 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 RD3LP0DJH9 198 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 ORM2P19652 201 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 ATP5G3P48201 142 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 LYZP61626 148 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 UBE2L3P68036 154 aaKnown RBP10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 C9orf152Q5JTZ5 239 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 MORN5Q5VZ52 161 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 NECAP1Q8NC96 275 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 UHRF2Q96PU4 802 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 ATP6V0BQ99437 205 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 SMIM7Q9BQ49 75 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 PAXXQ9BUH6 204 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 PARLQ9H300 379 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 NAT8Q9UHE5 227 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 ZNF580Q9UK33 172 aa10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 YTHDF2Q9Y5A9 579 aaKnown RBP10.44□□□□□ -0.74
HERPUD1-202ENST00000344114 A0A1W2PRE2 83 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 C7orf77A4D0Y5 90 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 FAM223BA6NKX1 122 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 LINC01548A6NM66 108 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 B4DEV8 164 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 F8W735 103 aaPredicted RBP10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 G3V318 75 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 OR2C1O95371 312 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 BRI3O95415 125 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 RHOGP84095 191 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 FAM223AQ8IWN6 122 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms