RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 STPG3Q8N7X2 389 aa11.34□□□□□ -0.59
CSRP1-201ENST00000340006 OR51G1Q8NGK1 321 aa11.34□□□□□ -0.59
CSRP1-201ENST00000340006 MDFIQ99750 246 aa11.34□□□□□ -0.59
CSRP1-201ENST00000340006 HRH4Q9H3N8 390 aa11.34□□□□□ -0.59
CSRP1-201ENST00000340006 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 IL4P05112 153 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 ORM2P19652 201 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 SLURP1P55000 103 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 PRR20EP86478 221 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 PRR20CP86479 221 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 PRR20DP86480 221 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 PRR20BP86481 221 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 PRR20AP86496 221 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 TOMM20LQ6UXN7 152 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 SLC39A9Q9NUM3 307 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 PFDN2Q9UHV9 154 aa11.33□□□□□ -0.6
CSRP1-201ENST00000340006 LINC00869P0C866 280 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 LYZP61626 148 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 ACOT6Q3I5F7 207 aaPredicted RBP11.32□□□□□ -0.6
CSRP1-201ENST00000340006 GCSAMLQ5JQS6 135 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 GPHB5Q86YW7 130 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 RPP25LQ8N5L8 163 aaKnown RBP11.32□□□□□ -0.6
CSRP1-201ENST00000340006 OR10G4Q8NGN3 311 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 OR10G9Q8NGN4 311 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 OR10G7Q8NGN6 311 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 OR1B1Q8NGR6 318 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 STAB1Q9NY15 2570 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 NDUFA4O00483 81 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 PF4P02776 101 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 SYNJ2BPP57105 145 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 OR4F17Q8NGA8 305 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 MARC2Q969Z3 335 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
CSRP1-201ENST00000340006 OR4F4Q96R69 305 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 DOK5Q9P104 306 aa11.32□□□□□ -0.6
CSRP1-201ENST00000340006 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
CSRP1-201ENST00000340006 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
CSRP1-201ENST00000340006 OR5G3P0C626 314 aa11.31□□□□□ -0.6
CSRP1-201ENST00000340006 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
CSRP1-201ENST00000340006 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
CSRP1-201ENST00000340006 HYPMO75409 117 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 MYCNOSP40205 109 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 KLF5Q13887 457 aaPredicted RBP11.3□□□□□ -0.6
CSRP1-201ENST00000340006 UNQ9165/PRO28630Q6UXU0 137 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 SFT2D1Q8WV19 159 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 A0A1B0GV50 99 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 WI2-2373I1.2A0A1W2PRP0 233 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 NPPCP23582 126 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
CSRP1-201ENST00000340006 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 DNAJC4Q9NNZ3 241 aa11.3□□□□□ -0.6
CSRP1-201ENST00000340006 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
CSRP1-201ENST00000340006 C1QL4Q86Z23 238 aa11.29□□□□□ -0.6
CSRP1-201ENST00000340006 ACTR3CQ9C0K3 210 aaPredicted RBP11.29□□□□□ -0.6
CSRP1-201ENST00000340006 RABAC1Q9UI14 185 aa11.29□□□□□ -0.6
CSRP1-201ENST00000340006 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSRP1-201ENST00000340006 CDC34P49427 236 aaPredicted RBP11.28□□□□□ -0.6
CSRP1-201ENST00000340006 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 LCN15Q6UWW0 184 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 OR1L4Q8NGR5 311 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 METTL26Q96S19 204 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 ELOA3CA0A087WX78 387 aaPredicted RBP11.28□□□□□ -0.6
CSRP1-201ENST00000340006 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 A0A1W2PPV4 95 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 SEC14L6B5MCN3 397 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
CSRP1-201ENST00000340006 IL34Q6ZMJ4 242 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 MBD3L1Q8WWY6 194 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 ZFAND3Q9H8U3 227 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 HIGD1AQ9Y241 93 aa11.28□□□□□ -0.6
CSRP1-201ENST00000340006 IGHV3-49A0A0A0MS15 119 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 M0QZ24 198 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 LGALS9O00182 355 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
CSRP1-201ENST00000340006 HBE1P02100 147 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 FHL3Q13643 280 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 TMEM37Q8WXS4 190 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 TMEM190Q8WZ59 177 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 NARS2Q96I59 477 aaKnown RBP11.27□□□□□ -0.61
CSRP1-201ENST00000340006 PFDN5Q99471 154 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 SEPSECSQ9HD40 501 aaKnown RBP11.27□□□□□ -0.61
CSRP1-201ENST00000340006 DAZ1Q9NQZ3 744 aaKnown RBP11.27□□□□□ -0.61
CSRP1-201ENST00000340006 IGHV3OR16-13A0A075B7E8 117 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 IGHV3-74A0A0B4J1X5 117 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 TRAV1-1A0A0B4J248 108 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 ZNF98A6NK75 572 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 OVOL1O14753 267 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 SCO1O75880 301 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms