RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MORN2Q502X0 79 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 ANKRD39Q53RE8 183 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 AMTNQ6UX39 209 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 WDR82Q6UXN9 313 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 TMEM105Q8N8V8 129 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 WDR31Q8NA23 367 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 FRMPD3Q5JV73 1810 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 PRB3Q04118 309 aaPredicted RBP10.89□□□□□ -0.67
COL2A1-201ENST00000337299 CD69Q07108 199 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 TEX48A0A1B0GUV7 120 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 TAX1BP3O14907 124 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 SAA1P0DJI8 122 aaPredicted RBP10.89□□□□□ -0.67
COL2A1-201ENST00000337299 EXOC3-AS1Q8N2X6 119 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 VKORC1Q9BQB6 163 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 SMKR1H3BMG3 65 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 SRSF7Q16629 238 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL2A1-201ENST00000337299 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 PLXNA2O75051 1894 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 K7ERJ3 54 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 Q6ZS49 121 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 ATP6V0BQ99437 205 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 K7EP34 96 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 IFI27P40305 119 aaPredicted RBP10.88□□□□□ -0.67
COL2A1-201ENST00000337299 ONECUT1Q9UBC0 465 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 NCOR2Q9Y618 2525 aa10.88□□□□□ -0.67
COL2A1-201ENST00000337299 KIF26AQ9ULI4 1882 aaPredicted RBP10.87□□□□□ -0.67
COL2A1-201ENST00000337299 SMAD7O15105 426 aaKnown RBP10.87□□□□□ -0.67
COL2A1-201ENST00000337299 IDI2-AS1Q9NZ38 188 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 CYSLTR1Q9Y271 337 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 GAGE12HA6NDE8 117 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 PRTN3P24158 256 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 GCSAMQ8N6F7 178 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 DSCAML1Q8TD84 2053 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 C21orf140B9A014 251 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 Q6P435 159 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 FAM216BQ8N7L0 139 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 FMC1Q96HJ9 113 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 PTPRQQ9UMZ3 2332 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 H3BRM9 83 aa10.87□□□□□ -0.67
COL2A1-201ENST00000337299 ETV2O00321 342 aaPredicted RBP10.87□□□□□ -0.67
COL2A1-201ENST00000337299 IGLV3-32A0A0A0MS00 114 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 ERVK11-1P61568 191 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 GFRALQ6UXV0 394 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 ZC2HC1BQ5TFG8 222 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 C1orf122Q6ZSJ8 110 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 OR5AN1Q8NGI8 311 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 MRPL20Q9BYC9 149 aaKnown RBP10.86□□□□□ -0.67
COL2A1-201ENST00000337299 UPK2O00526 184 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 ODF3L1Q8IXM7 274 aa10.86□□□□□ -0.67
COL2A1-201ENST00000337299 ZNF256Q9Y2P7 627 aaPredicted RBP10.86□□□□□ -0.67
COL2A1-201ENST00000337299 H3BMG7 143 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 OR4C13Q8NGP0 309 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 DEFB104AQ8WTQ1 72 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 ARMS2P0C7Q2 107 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 RASL11AQ6T310 242 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 ARPC1AQ92747 370 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 K7EMI3 77 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 COX8AP10176 69 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 PPP1R32Q7Z5V6 425 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 AMN1Q8IY45 258 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 SSC4DQ8WTU2 575 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 JMJD8Q96S16 334 aa10.85□□□□□ -0.67
COL2A1-201ENST00000337299 CACNG8Q8WXS5 425 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 LINC00470Q9BZP3 86 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 NGBQ9NPG2 151 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 RAXQ9Y2V3 346 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 CEP295Q9C0D2 2601 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 A0A1W2PPM0 123 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 SH2D6Q7Z4S9 175 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 MED12LQ86YW9 2145 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 DPM2O94777 84 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 CHAC1Q9BUX1 264 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 KIAA1549Q9HCM3 1950 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 IGKCP01834 107 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 CFHR2P36980 270 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
COL2A1-201ENST00000337299 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 HOXA3O43365 443 aaPredicted RBP10.83□□□□□ -0.68
COL2A1-201ENST00000337299 TOMM40O96008 361 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 FAM214BQ7L5A3 538 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 GGNQ86UU5 652 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 IMMP1LQ96LU5 166 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 TCRBV4S1A1TA0A5B7 111 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 PINLYPA6NC86 204 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 IGLV3-12A0A075B6K2 115 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 PPBPP02775 128 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 CCL3L1P16619 93 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 CD300EQ496F6 205 aaPredicted RBP10.83□□□□□ -0.68
COL2A1-201ENST00000337299 PSG8Q9UQ74 426 aa10.83□□□□□ -0.68
COL2A1-201ENST00000337299 TRBV6-6A0A0A6YYG2 114 aa10.82□□□□□ -0.68
COL2A1-201ENST00000337299 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
COL2A1-201ENST00000337299 IGHV3-23P01764 117 aa10.82□□□□□ -0.68
COL2A1-201ENST00000337299 TCRAP04437 139 aa10.82□□□□□ -0.68
COL2A1-201ENST00000337299 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
COL2A1-201ENST00000337299 GAGE2EQ4V326 116 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms