RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 WIPF1O43516 503 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 HYPMO75409 117 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 BMI1P35226 326 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 PLP1P60201 277 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 B2MP61769 119 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 ZNF345Q14585 488 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 PXDC1Q5TGL8 231 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 RNF2Q99496 336 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 RSG1Q9BU20 258 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 TMEM231Q9H6L2 316 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 U3KQE9 123 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 BORCS7-ASMTA0A0B4J1R7 106 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 A0A0D9SG52 128 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 TAAR5O14804 337 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 OR5G3P0C626 314 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 ZFP69Q49AA0 526 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 RPL7L1Q6DKI1 246 aaKnown RBP10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 Q6ZRG5 221 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 OR2K2Q8NGT1 345 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 GRAMD2BQ96HH9 432 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 HYLS1Q96M11 299 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 VSIRQ9H7M9 311 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 KCNIP2Q9NS61 270 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 PFDN2Q9UHV9 154 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 HIGD1AQ9Y241 93 aa10.64□□□□□ -0.71
APOBEC3B-202ENST00000335760 IZUMO1RA6ND01 250 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 COX7A2P2O60397 106 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 LAMTOR1Q6IAA8 161 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 PATE2Q6UY27 113 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 TMUB2Q71RG4 321 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 HSD17B11Q8NBQ5 300 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 ARPC5LQ9BPX5 153 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 ARV1Q9H2C2 271 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 RFNGQ9Y644 331 aa10.63□□□□□ -0.71
APOBEC3B-202ENST00000335760 KANTRA0A1W2PQU2 76 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 BUB3O43684 328 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 S100A7P31151 101 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 KRTAP10-11P60412 298 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 BEAN1Q3B7T3 259 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 TCF24Q7RTU0 167 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 OR1L4Q8NGR5 311 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 TMEM37Q8WXS4 190 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 CYTL1Q9NRR1 136 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
APOBEC3B-202ENST00000335760 ELOA3CA0A087WX78 387 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 ZNF98A6NK75 572 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 BCL2L11O43521 198 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 PFDN1O60925 122 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 JTBO76095 146 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 RPL11P62913 178 aaKnown RBP10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 EGFEM1PQ0D2K5 195 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 GUCA2BQ16661 112 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 LGALSLQ3ZCW2 172 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 FFAR4Q5NUL3 377 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 C10orf113Q5VZT2 155 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 UHRF2Q96PU4 802 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 SHANK2-AS3Q9BTD1 123 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 SCRT1Q9BWW7 348 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 SLC25A39Q9BZJ4 359 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 SLC25A22Q9H936 323 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 DNAJC4Q9NNZ3 241 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 ZMAT5Q9UDW3 170 aaKnown RBP10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 TIMM9Q9Y5J7 89 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 NOTCH3Q9UM47 2321 aa10.61□□□□□ -0.71
APOBEC3B-202ENST00000335760 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 TRAV25A0A0B4J276 109 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 H3BRN7 92 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 ATP6V0CP27449 155 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 C1orf194Q5T5A4 169 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 KPRPQ5T749 579 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 LEMD1Q68G75 181 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 LINC00305Q7Z4B0 112 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 PFDN5Q99471 154 aa10.6□□□□□ -0.71
APOBEC3B-202ENST00000335760 ZNF785A8K8V0 405 aa10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 TSPAN4O14817 238 aa10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 CD5P06127 495 aa10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 GP9P14770 177 aa10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 OR8I2Q8N0Y5 310 aa10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 GATAD1Q8WUU5 269 aa10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 ZNF471Q9BX82 626 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 SH3BGRL3Q9H299 93 aa10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 ZNF256Q9Y2P7 627 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3B-202ENST00000335760 HELTA6NFD8 242 aa10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 TFPI2P48307 235 aa10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 MORN5Q5VZ52 161 aa10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 SIGLEC15Q6ZMC9 328 aa10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 C9orf62Q8N4C0 152 aa10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 GBGT1Q8N5D6 347 aa10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 GNPNAT1Q96EK6 184 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 PSMG3Q9BT73 122 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 454.2 ms