RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 BAP18Q8IXM2 172 aa13.27□□□□□ -0.29
CHGA-202ENST00000334654 HSD17B11Q8NBQ5 300 aa13.27□□□□□ -0.29
CHGA-202ENST00000334654 PBDC1Q9BVG4 233 aa13.27□□□□□ -0.29
CHGA-202ENST00000334654 ZNF471Q9BX82 626 aaPredicted RBP13.27□□□□□ -0.29
CHGA-202ENST00000334654 SIGLEC8Q9NYZ4 499 aa13.27□□□□□ -0.29
CHGA-202ENST00000334654 UBQLN2Q9UHD9 624 aa13.27□□□□□ -0.29
CHGA-202ENST00000334654 SMPXQ9UHP9 88 aa13.27□□□□□ -0.29
CHGA-202ENST00000334654 IGHV7-4-1A0A0J9YVY3 117 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 CD33P20138 364 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 ATP6V0CP27449 155 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 B2MP61769 119 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 LRRC20Q8TCA0 184 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 TMEM37Q8WXS4 190 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 ST8SIA2Q92186 375 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 GINS3Q9BRX5 216 aa13.26□□□□□ -0.29
CHGA-202ENST00000334654 IGHV3-49A0A0A0MS15 119 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 ORM2P19652 201 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 NPPCP23582 126 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 GCSAMLQ5JQS6 135 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 SH3BGRL3Q9H299 93 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 VSIRQ9H7M9 311 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 DOK5Q9P104 306 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 TIMM9Q9Y5J7 89 aa13.25□□□□□ -0.29
CHGA-202ENST00000334654 IGHV3OR16-13A0A075B7E8 117 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 IGHV3-74A0A0B4J1X5 117 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 C17orf112F2Z3M2 114 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 CHEK1O14757 476 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 IGLL1P15814 213 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 RAB14P61106 215 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 PXDC1Q5TGL8 231 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 ZNF709Q8N972 641 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 OR1B1Q8NGR6 318 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 MARC2Q969Z3 335 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 METTL26Q96S19 204 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 PSMG3Q9BT73 122 aaPredicted RBP13.24□□□□□ -0.29
CHGA-202ENST00000334654 ELOVL1Q9BW60 279 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 MLXQ9UH92 298 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 RABAC1Q9UI14 185 aa13.24□□□□□ -0.29
CHGA-202ENST00000334654 SEC14L6B5MCN3 397 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 BUB3O43684 328 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 HYPMO75409 117 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 RHPN1-AS1Q9BWJ2 59 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 SAP30O75446 220 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 Q6ZRG5 221 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 OR2G3Q8NGZ4 309 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 UHRF2Q96PU4 802 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 DNAJC4Q9NNZ3 241 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 PLA2G2EQ9NZK7 142 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 SELENOKQ9Y6D0 94 aa13.23□□□□□ -0.29
CHGA-202ENST00000334654 IGHV3-66A0A0C4DH42 116 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 H3BRN7 92 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 WIPF1O43516 503 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 OR5G3P0C626 314 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 SPP1P10451 314 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 DEFB114Q30KQ6 69 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 FFAR4Q5NUL3 377 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 MORN5Q5VZ52 161 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 GNPNAT1Q96EK6 184 aaPredicted RBP13.22□□□□□ -0.29
CHGA-202ENST00000334654 MCRIP2Q9BUT9 160 aaKnown RBP13.22□□□□□ -0.29
CHGA-202ENST00000334654 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
CHGA-202ENST00000334654 SLC25A32Q9H2D1 315 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 KCNIP2Q9NS61 270 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
CHGA-202ENST00000334654 NBEAL1Q6ZS30 2694 aa13.21□□□□□ -0.29
CHGA-202ENST00000334654 ELOA3CA0A087WX78 387 aaPredicted RBP13.21□□□□□ -0.3
CHGA-202ENST00000334654 COX7A2P2O60397 106 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 SEC11BP0C7V7 166 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 CLLU1Q5K131 121 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 FAM90A2PQ658T7 463 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 RNF2Q99496 336 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 SHANK2-AS3Q9BTD1 123 aa13.21□□□□□ -0.3
CHGA-202ENST00000334654 SORL1Q92673 2214 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 ZNF98A6NK75 572 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 INSL3P51460 131 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 SERF2P84101 59 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 C10orf113Q5VZT2 155 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 OR1L4Q8NGR5 311 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 GATAD1Q8WUU5 269 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 SCRT1Q9BWW7 348 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 NOTCH1P46531 2555 aa13.2□□□□□ -0.3
CHGA-202ENST00000334654 SPATA31B1PQ5VZV4 182 aa13.19□□□□□ -0.3
CHGA-202ENST00000334654 PFDN5Q99471 154 aa13.19□□□□□ -0.3
CHGA-202ENST00000334654 SEPSECSQ9HD40 501 aaKnown RBP13.19□□□□□ -0.3
CHGA-202ENST00000334654 TECRQ9NZ01 308 aaKnown RBP13.19□□□□□ -0.3
CHGA-202ENST00000334654 A0A1W2PS18 150 aa13.18□□□□□ -0.3
CHGA-202ENST00000334654 IZUMO1RA6ND01 250 aa13.18□□□□□ -0.3
CHGA-202ENST00000334654 M6PRP20645 277 aa13.18□□□□□ -0.3
CHGA-202ENST00000334654 RAB5CP51148 216 aa13.18□□□□□ -0.3
CHGA-202ENST00000334654 RAB2AP61019 212 aa13.18□□□□□ -0.3
CHGA-202ENST00000334654 CD300EQ496F6 205 aaPredicted RBP13.18□□□□□ -0.3
CHGA-202ENST00000334654 C1orf194Q5T5A4 169 aa13.18□□□□□ -0.3
CHGA-202ENST00000334654 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
CHGA-202ENST00000334654 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms