RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MS4A2Q01362 244 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 NHLH2Q02577 135 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 IL18Q14116 193 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 EIF2B1Q14232 305 aaKnown RBP0.95□□□□□ -2.26
LINC00643-201ENST00000334389 PSG5Q15238 335 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 MED22Q15528 200 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 VWC2Q2TAL6 325 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 Q6Q795 121 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 IZUMO2Q6UXV1 221 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 BRD3OSQ6XYD6 125 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 S100A7AQ86SG5 101 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 HOGA1Q86XE5 327 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 DEFB107AQ8IZN7 70 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 UBAC2Q8NBM4 344 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM185AQ8NFB2 350 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR2AK2Q8NG84 335 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR9I1Q8NGQ6 314 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR6K6Q8NGW6 343 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR11H2Q8NH07 326 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR1S1Q8NH92 325 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 CNIH3Q8TBE1 160 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 MRPL30Q8TCC3 161 aaKnown RBP0.95□□□□□ -2.26
LINC00643-201ENST00000334389 DCANP1Q8TF63 244 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM263Q8WUH6 116 aaKnown RBP0.95□□□□□ -2.26
LINC00643-201ENST00000334389 CYGBQ8WWM9 190 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 MRGPRFQ96AM1 343 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 GPR146Q96CH1 333 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 KIR2DL4Q99706 377 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 WFDC6Q9BQY6 131 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 GNB1LQ9BYB4 327 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 CALYQ9NYX4 217 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 THYN1Q9P016 225 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 SVEP1Q4LDE5 3571 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 IGKV1-9A0A0C4DH69 117 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 A0A0G2JND7 137 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 C5orf49A4QMS7 147 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 LINC00587B1AMM8 73 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 B2RBV5 119 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 J3QRK9 145 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 GYG2O15488 501 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 DLEU1O43261 78 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 CSTBP04080 98 aaKnown RBP0.95□□□□□ -2.26
LINC00643-201ENST00000334389 ATP5G1P05496 136 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 FABP1P07148 127 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 PSKH1P11801 424 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 P2RY1P47900 373 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 ATP5G3P48201 142 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TAS2R46P59540 309 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 RRAS2P62070 204 aaPredicted RBP0.95□□□□□ -2.26
LINC00643-201ENST00000334389 BLCAPP62952 87 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 ATP5G2Q06055 141 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 KRTAP19-8Q3LI54 63 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 KRTAP13-3Q3SY46 172 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR2B11Q5JQS5 317 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 UFSP1Q6NVU6 142 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 AMTNQ6UX39 209 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TEX43Q6ZNM6 134 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 Q6ZRP5 223 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 NIT1Q86X76 327 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 FGFRL1Q8N441 504 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 THAP8Q8NA92 274 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM229BQ8NBD8 167 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 ZNRF1Q8ND25 227 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 ICA1LQ8NDH6 482 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR5AP2Q8NGF4 316 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR51S1Q8NGJ8 323 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR5B3Q8NH48 314 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 OR5AK3PQ8NH89 298 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TPD52L3Q96J77 140 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM56Q96MV1 263 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 SCGB3A2Q96PL1 93 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 HIST1H2AAQ96QV6 131 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 C12orf4Q9NQ89 552 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 RPRD1BQ9NQG5 326 aaKnown RBP0.95□□□□□ -2.26
LINC00643-201ENST00000334389 PRR34Q9NV39 138 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 FLVCR2Q9UPI3 526 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM56-RWDD3S4R434 201 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 U3KQV3 271 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 ADGRG4Q8IZF6 3080 aa0.95□□□□□ -2.26
LINC00643-201ENST00000334389 NUP214P35658 2090 aaPredicted RBP0.95□□□□□ -2.26
LINC00643-201ENST00000334389 TRAV1-1A0A0B4J248 108 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TRAV24A0A0B4J272 114 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 IGHV3-66A0A0C4DH42 116 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 A0A0G2JN53 185 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PNMA8CA0A1B0GUJ8 204 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 LOC107986453A0A1B0GWG9 222 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 A0A1W2PQL4 384 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 LINC00473A8K010 186 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 C9JCJ5 164 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 F6UZH7 168 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SMLR1H3BR10 107 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RAB29O14966 203 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 XRCC3O43542 346 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MPC2O95563 127 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 NCR2O95944 276 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 GCGP01275 180 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 HIST1H1DP16402 221 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 HRH1P35367 487 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 POLR2IP36954 125 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PPT1P50897 306 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms