RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 GGNBP1Q5YKI7 109 aa10.51□□□□□ -0.73
CTHRC1-201ENST00000330295 OR1S2Q8NGQ3 325 aa10.51□□□□□ -0.73
CTHRC1-201ENST00000330295 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
CTHRC1-201ENST00000330295 FLVCR2Q9UPI3 526 aa10.51□□□□□ -0.73
CTHRC1-201ENST00000330295 PUS1Q9Y606 427 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTHRC1-201ENST00000330295 IGHV3OR16-8A0A075B7F1 116 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 WRBO00258 174 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 ZNF207O43670 478 aaKnown RBP10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 PITX3O75364 302 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 FABP1P07148 127 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 NPPCP23582 126 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 RND2P52198 227 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 PAFAH1B2P68402 229 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 ZNF846Q147U1 533 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 TOMM20LQ6UXN7 152 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 Q8WTZ3 238 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 RHPN1-AS1Q9BWJ2 59 aa10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 PAIP2BQ9ULR5 123 aaKnown RBP10.5□□□□□ -0.73
CTHRC1-201ENST00000330295 FAM240BA0A1B0GVZ2 78 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 KRTAP29-1A8MX34 341 aaPredicted RBP10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 PLA2G10O15496 165 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 SYNGR2O43760 224 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 TCRBP04435 133 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 GIG44P09565 113 aaPredicted RBP10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 ANXA7P20073 488 aaKnown RBP10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 OR10J1P30954 320 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 GPX4P36969 197 aaPredicted RBP10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 TFPI2P48307 235 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 PRSS54Q6PEW0 395 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 ACY3Q96HD9 319 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 SLC35E1Q96K37 410 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 METTL26Q96S19 204 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 PFDN2Q9UHV9 154 aa10.49□□□□□ -0.73
CTHRC1-201ENST00000330295 CHEK1O14757 476 aa10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 BTCP35070 178 aa10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 EIF2B2P49770 351 aaKnown RBP10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 YPEL3P61236 119 aaPredicted RBP10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 MLANAQ16655 118 aa10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 MORN3Q6PF18 240 aaPredicted RBP10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 Q6ZSN1 163 aa10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
CTHRC1-201ENST00000330295 SMR3BP02814 79 aaPredicted RBP10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 IAPPP10997 89 aa10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 NKX2-1P43699 371 aaPredicted RBP10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 RPL11P62913 178 aaKnown RBP10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 TIGITQ495A1 244 aa10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 TMEM41BQ5BJD5 291 aa10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 MITD1Q8WV92 249 aa10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 NPIPB3Q92617 1050 aa10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 NUDT15Q9NV35 164 aa10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 TBC1D24Q9ULP9 559 aa10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 STRAPQ9Y3F4 350 aaKnown RBP10.47□□□□□ -0.73
CTHRC1-201ENST00000330295 TRAV6A0A075B6T7 132 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 ZFP92A6NM28 416 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 DNASE2O00115 360 aaPredicted RBP10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 ADAP1O75689 374 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 IGKV1-17P01599 117 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 IGLC1P0CG04 106 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 RD3LP0DJH9 198 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 ENKURQ8TC29 256 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 RNF2Q99496 336 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 MAGT1Q9H0U3 335 aa10.46□□□□□ -0.73
CTHRC1-201ENST00000330295 IGHV3-49A0A0A0MS15 119 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 BTF3P20290 206 aaKnown RBP10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 NUP62P37198 522 aaPredicted RBP10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 DEFA1P59665 94 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 DEFA3P59666 94 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 ASAH1Q13510 395 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 IAH1Q2TAA2 248 aaPredicted RBP10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 SPANXN5Q5MJ07 72 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 TCF24Q7RTU0 167 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 ZNRF2Q8NHG8 242 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 ZNF431Q8TF32 576 aaPredicted RBP10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 GSKIPQ9P0R6 139 aa10.45□□□□□ -0.74
CTHRC1-201ENST00000330295 IGKV3-7A0A075B6H7 116 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 IGHV3OR16-13A0A075B7E8 117 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 IGHV3-74A0A0B4J1X5 117 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 UPK1BO75841 260 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 ID3Q02535 119 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 LEMD1Q68G75 181 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 ATG101Q9BSB4 218 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 VSIRQ9H7M9 311 aa10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 GPN1Q9HCN4 374 aaPredicted RBP10.44□□□□□ -0.74
CTHRC1-201ENST00000330295 HELTA6NFD8 242 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 FAM25EA8MYX2 175 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 SCGB1D2O95969 90 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 TOMM40O96008 361 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 CFDP00746 253 aaPredicted RBP10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 IL4P05112 153 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 HNRNPCP07910 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 C4BPBP20851 252 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms