RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FGF8P55075 233 aaPredicted RBP12.76□□□□□ -0.37
PDLIM1-201ENST00000329399 HAGHQ16775 308 aa12.76□□□□□ -0.37
PDLIM1-201ENST00000329399 OR5T1Q8NG75 326 aa12.76□□□□□ -0.37
PDLIM1-201ENST00000329399 C21orf62Q9NYP8 219 aa12.76□□□□□ -0.37
PDLIM1-201ENST00000329399 A0A1W2PRX2 142 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 FAM223BA6NKX1 122 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 M0QZ24 198 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 GNG7O60262 68 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 HYPMO75409 117 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 MEF2BQ02080 365 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 FAM74A3Q4VXF1 159 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 C19orf54Q5BKX5 351 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 GCSAMLQ5JQS6 135 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 SOHLH1Q5JUK2 328 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 FAM209BQ5JX69 171 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 FAM223AQ8IWN6 122 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 TMEM231Q9H6L2 316 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 SEPSECSQ9HD40 501 aaKnown RBP12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 FBXL7Q9UJT9 491 aa12.75□□□□□ -0.37
PDLIM1-201ENST00000329399 TRBV7-1A0A0A6YYK4 115 aa12.74□□□□□ -0.37
PDLIM1-201ENST00000329399 PDE6DO43924 150 aa12.74□□□□□ -0.37
PDLIM1-201ENST00000329399 TOMM40O96008 361 aa12.74□□□□□ -0.37
PDLIM1-201ENST00000329399 SRP19P09132 144 aaKnown RBP12.74□□□□□ -0.37
PDLIM1-201ENST00000329399 RD3LP0DJH9 198 aa12.74□□□□□ -0.37
PDLIM1-201ENST00000329399 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
PDLIM1-201ENST00000329399 RARRES2Q99969 163 aa12.74□□□□□ -0.37
PDLIM1-201ENST00000329399 DNAH3Q8TD57 4116 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 ARL14EPLP0DKL9 152 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 GCHFRP30047 84 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 ZNF90Q03938 601 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 ECSCRQ19T08 205 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 OR51G1Q8NGK1 321 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 Q8WTZ3 238 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 TMEM37Q8WXS4 190 aa12.73□□□□□ -0.37
PDLIM1-201ENST00000329399 F6UZH7 168 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 IGKV1-17P01599 117 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 DEFA5Q01523 94 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 EEF1AKMT3Q96AZ1 226 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 C9JQL5 133 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 NDUFB8O95169 186 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 OR2C1O95371 312 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 IGHV3-48P01763 117 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 PSG1P11464 419 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 C19orf35Q6ZS72 473 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 NDUFA11Q86Y39 141 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 IQCF2Q8IXL9 164 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 TCEAL7Q9BRU2 100 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 HIGD1AQ9Y241 93 aa12.72□□□□□ -0.37
PDLIM1-201ENST00000329399 NUPL2O15504 423 aaKnown RBP12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 OR2J3O76001 311 aa12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 ADCYAP1P18509 176 aa12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 GATA2P23769 480 aaPredicted RBP12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 RHOGP84095 191 aa12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 Q56UQ5 140 aa12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 MIR17HGQ75NE6 70 aa12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 ZNF355PQ9NSJ1 428 aa12.71□□□□□ -0.38
PDLIM1-201ENST00000329399 A0A0G2JLM5 398 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 A0A1W2PRE2 83 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 WI2-2373I1.2A0A1W2PRP0 233 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 G3V318 75 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 HMGB3O15347 200 aaKnown RBP12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 PAGE4O60829 102 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 CFHR3Q02985 330 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 ATP5G2Q06055 141 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 PNRC1Q12796 327 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 TIGITQ495A1 244 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 OR1B1Q8NGR6 318 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 ZNF502Q8TBZ5 544 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 UHRF2Q96PU4 802 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 TMPRSS5Q9H3S3 457 aa12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 MRPL27Q9P0M9 148 aaKnown RBP12.7□□□□□ -0.38
PDLIM1-201ENST00000329399 IGHV3-21A0A0B4J1V1 117 aa12.69□□□□□ -0.38
PDLIM1-201ENST00000329399 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
PDLIM1-201ENST00000329399 OR7C2O60412 319 aa12.69□□□□□ -0.38
PDLIM1-201ENST00000329399 ORM2P19652 201 aa12.69□□□□□ -0.38
PDLIM1-201ENST00000329399 PPIFP30405 207 aaKnown RBP12.69□□□□□ -0.38
PDLIM1-201ENST00000329399 NIPSNAP3BQ9BS92 247 aa12.69□□□□□ -0.38
PDLIM1-201ENST00000329399 B4DEV8 164 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 RAB9AP51151 201 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 CD81P60033 236 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 ZNF600Q6ZNG1 722 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 ZNF491Q8N8L2 437 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 CYB561D1Q8N8Q1 229 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 FAM167A-AS1Q96KT0 104 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 PAXXQ9BUH6 204 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 OR51M1Q9H341 326 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 TMEM14CQ9P0S9 112 aa12.68□□□□□ -0.38
PDLIM1-201ENST00000329399 F8W735 103 aaPredicted RBP12.67□□□□□ -0.38
PDLIM1-201ENST00000329399 RPLP1P05386 114 aaKnown RBP12.67□□□□□ -0.38
PDLIM1-201ENST00000329399 CTSGP08311 255 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms