RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ATRXP46100 2492 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 KIR3DL3Q8N743 410 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 AKAP6Q13023 2319 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 TNFRSF13BO14836 293 aaPredicted RBP11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 C3orf79P0CE67 100 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 C18orf32Q8TCD1 76 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 SPATA45Q537H7 98 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 Q9H3A6 140 aa11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 TIMM8BQ9Y5J9 83 aaPredicted RBP11.23□□□□□ -0.61
ATP2C1-201ENST00000328560 PPIAL4CA0A0B4J2A2 164 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 PPIAL4GP0DN37 164 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 RAB4AP20338 218 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 LINC00322Q6ZN03 302 aaPredicted RBP11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 TEX45Q8NA69 505 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 STXBP6Q8NFX7 210 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 JKAMPQ9P055 326 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 M0QZ24 198 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 FSTL3O95633 263 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 PSG1P11464 419 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 FAM71F2Q6NXP2 309 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 GPR82Q96P67 336 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 CLEC7AQ9BXN2 247 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 RELNP78509 3460 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 TXN2Q99757 166 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 IGF2RP11717 2491 aa11.22□□□□□ -0.61
ATP2C1-201ENST00000328560 M0R2Z0 102 aa11.21□□□□□ -0.61
ATP2C1-201ENST00000328560 P01737 135 aa11.21□□□□□ -0.61
ATP2C1-201ENST00000328560 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.61
ATP2C1-201ENST00000328560 KAAG1Q9UBP8 84 aa11.21□□□□□ -0.61
ATP2C1-201ENST00000328560 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.61
ATP2C1-201ENST00000328560 LRBAP50851 2863 aa11.21□□□□□ -0.61
ATP2C1-201ENST00000328560 VWC2LB2RUY7 222 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 MMDQ15546 238 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 PMCHL1Q16048 86 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 Q56UQ5 140 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 PRNTQ86SH4 94 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 NIT1Q86X76 327 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 TRGV9Q99603 122 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 MBD6Q96DN6 1003 aa11.21□□□□□ -0.62
ATP2C1-201ENST00000328560 TFPI2P48307 235 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 ARF6P62330 175 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 KLF17Q5JT82 389 aaPredicted RBP11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 SVIPQ8NHG7 77 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 ZNF596Q8TC21 504 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 TIMD4Q96H15 378 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 RASL11BQ9BPW5 248 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 SH2D7A6NKC9 451 aaPredicted RBP11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 UCNP55089 124 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 HES1Q14469 280 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 FAM231DQ6ZW35 169 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 Q71RC1 249 aaPredicted RBP11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 CHRDL1Q9BU40 450 aa11.2□□□□□ -0.62
ATP2C1-201ENST00000328560 Q8N976 141 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 C8orf31Q8N9H6 132 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 TMEM116Q8NCL8 245 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 TCRAP04437 139 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 CRYGCP07315 174 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 OR8B3Q8NGG8 313 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 C8orf46Q8TAG6 207 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 OR8B2Q96RD0 313 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 RPP21Q9H633 154 aaKnown RBP11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 COL8A1P27658 744 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 MYCNOSP40205 109 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 Q6ZN92 141 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 TPPP3Q9BW30 176 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 RAB1BQ9H0U4 201 aa11.19□□□□□ -0.62
ATP2C1-201ENST00000328560 TIMM23O14925 209 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 GP9P14770 177 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 CLEC5AQ9NY25 188 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 RAXQ9Y2V3 346 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 CBY1Q9Y3M2 126 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 A8MWL6 223 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 TMEM11P17152 192 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 CA7P43166 264 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 C17orf77Q96MU5 243 aa11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 ALKBH7Q9BT30 221 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms