RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SPATA31B1PQ5VZV4 182 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 PRIMA1Q86XR5 153 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 MBD3L1Q8WWY6 194 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 SEPSECSQ9HD40 501 aaKnown RBP7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 NUDT19A8MXV4 375 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 H2AFB1P0C5Y9 115 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 KRTAP10-3P60369 221 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 S100A7AQ86SG5 101 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 TMEM190Q8WZ59 177 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 RAB24Q969Q5 203 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 ATRQ13535 2644 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 MAP1LC3B2A6NCE7 125 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 RPEL1Q2QD12 228 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 KRTAP24-1Q3LI83 254 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 AWAT1Q58HT5 328 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 MIR17HGQ75NE6 70 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 LINC00305Q7Z4B0 112 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 GPHB5Q86YW7 130 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 UHRF2Q96PU4 802 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 MAP1LC3BQ9GZQ8 125 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 RABAC1Q9UI14 185 aa7.86□□□□□ -1.15
VIPAS39-201ENST00000327028 TRAV1-1A0A0B4J248 108 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 LINC01619G3V211 115 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 H3BRN7 92 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 ZP3P21754 424 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 HIST2H2BDQ6DRA6 164 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 LCN15Q6UWW0 184 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 LYPD6BQ8NI32 183 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 SHANK2-AS3Q9BTD1 123 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 SLC25A39Q9BZJ4 359 aaPredicted RBP7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 HBE1P02100 147 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 STAG3L2P0CL84 134 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 STAG3L3P0CL85 134 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 C8orf88P0DMB2 117 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 S100A7P31151 101 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 HOXD3P31249 432 aaPredicted RBP7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 TAS2R45P59539 299 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 DEFB136Q30KP8 78 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 FAM106AQ4KMX7 169 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 KHDC3LQ587J8 217 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 MORN5Q5VZ52 161 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 UNQ9165/PRO28630Q6UXU0 137 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 C8orf86Q6ZUL3 223 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 REC114Q7Z4M0 266 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 NDUFA11Q86Y39 141 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 OR1N2Q8NGR9 330 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 SFT2D1Q8WV19 159 aa7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 TECRQ9NZ01 308 aaKnown RBP7.85□□□□□ -1.15
VIPAS39-201ENST00000327028 A0A1W2PRX2 142 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 ADARB2-AS1A8MUL3 147 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 TEX46H3BTG2 121 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 EIF3GO75821 320 aaKnown RBP eCLIP7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 METTL26Q96S19 204 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 C20orf24Q9BUV8 137 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 SLC25A2Q9BXI2 301 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 IGHV3OR16-8A0A075B7F1 116 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 C1QL4Q86Z23 238 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 OR11H1Q8NG94 326 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 DPF1Q92782 380 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 RAX2Q96IS3 184 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 FAM167A-AS1Q96KT0 104 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 SCRT1Q9BWW7 348 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 HRH4Q9H3N8 390 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 RNF24Q9Y225 148 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 UFC1Q9Y3C8 167 aa7.84□□□□□ -1.15
VIPAS39-201ENST00000327028 A8MWP6 167 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 LGALS9O00182 355 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 CXorf1O96002 111 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 ARL14EPLP0DKL9 152 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 CRYBB3P26998 211 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 FGF8P55075 233 aaPredicted RBP7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 FHL3Q13643 280 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 PFDN2Q9UHV9 154 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 TRAV5A0A0B4J249 113 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 ZNF320A2RRD8 509 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 K7EMT4 169 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 NPPCP23582 126 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 KLF5Q13887 457 aaPredicted RBP7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 DAZ1Q9NQZ3 744 aaKnown RBP7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 U3KQE9 123 aa7.83□□□□□ -1.16
VIPAS39-201ENST00000327028 A0A1B0GV50 99 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 ZNF98A6NK75 572 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 CCL24O00175 119 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 ZNF207O43670 478 aaKnown RBP7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 SLURP1P55000 103 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 LEMD1Q68G75 181 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 PQLC2Q6ZP29 291 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 STXBP6Q8NFX7 210 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 NARS2Q96I59 477 aaKnown RBP7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 CITED1Q99966 193 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 MED9Q9NWA0 146 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 TENM1Q9UKZ4 2725 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 LINC00862A6NCI5 91 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 OR7C2O60412 319 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 GP9P14770 177 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 SYNJ2BPP57105 145 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 NSUN5P1Q3KNT7 163 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 IL34Q6ZMJ4 242 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 ZNF503Q96F45 646 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms