RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PTPRBP23467 1997 aa10.37□□□□□ -0.75
HMGCS1-201ENST00000325110 IGHV1-69-2A0A0G2JMI3 117 aa10.37□□□□□ -0.75
HMGCS1-201ENST00000325110 SMIM27A0A1W2PRY6 76 aa10.37□□□□□ -0.75
HMGCS1-201ENST00000325110 MC5RP33032 325 aa10.37□□□□□ -0.75
HMGCS1-201ENST00000325110 SSX8Q7RTT4 187 aa10.37□□□□□ -0.75
HMGCS1-201ENST00000325110 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
HMGCS1-201ENST00000325110 IGHV1-8P0DP01 117 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 PRRX1P54821 245 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 STXBP6Q8NFX7 210 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 C22orf46C9J442 243 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 DLEU1O43261 78 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 LOXP28300 417 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 HBBP68871 147 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 TEX36Q5VZQ5 186 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 HSBP1L1C9JCN9 74 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 PAX1P15863 534 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 PNKDQ8N490 385 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 LAMTOR2Q9Y2Q5 125 aa10.36□□□□□ -0.75
HMGCS1-201ENST00000325110 COL27A1Q8IZC6 1860 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 ZNF292O60281 2723 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 NIT1Q86X76 327 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 SRSF12Q8WXF0 261 aaKnown RBP10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 TMEM133Q9H2Q1 129 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 NCOR2Q9Y618 2525 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 PSG1P11464 419 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 ARF6P62330 175 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 TMEM30BQ3MIR4 351 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 GDF5OSQ5U4N7 250 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 C5orf17Q8NAS9 161 aa10.35□□□□□ -0.75
HMGCS1-201ENST00000325110 CEACAM8P31997 349 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 UNQ5815/PRO19632Q6UWF5 114 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 RAI1Q7Z5J4 1906 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 IGHV3-23P01764 117 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 CA7P43166 264 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 LGALS7P47929 136 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 PTTG1IPP53801 180 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 PPP1R27Q86WC6 154 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 DSCAML1Q8TD84 2053 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 IGKV1D-37A0A075B6S9 117 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 PPIAL4CA0A0B4J2A2 164 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 C20orf202A1L168 122 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 NCBP2LA6PVI3 153 aaKnown RBP10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 LEPROTL1O95214 131 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 PPIAL4GP0DN37 164 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 FOXC1Q12948 553 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 STPG4Q8N801 248 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 NCOR1P1Q9H4R4 102 aa10.34□□□□□ -0.75
HMGCS1-201ENST00000325110 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 A0A1B0GWJ7 208 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 CGB1A6NKQ9 187 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 SNAI2O43623 268 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 CD3EP07766 207 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 IGLC2P0DOY2 106 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 IGLC3P0DOY3 106 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 COMPP49747 757 aaPredicted RBP10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 LINC00322Q6ZN03 302 aaPredicted RBP10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 OR4F17Q8NGA8 305 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 IGHV2-26A0A0B4J1V2 119 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 OR4C46A6NHA9 309 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 TCRAP04437 139 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 IL4P05112 153 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 THBDP07204 575 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 VAMP3Q15836 100 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 PRSS33Q8NF86 280 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 NUP37Q8NFH4 326 aa10.33□□□□□ -0.76
HMGCS1-201ENST00000325110 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.764e-8■■■□□ 16.3
HMGCS1-201ENST00000325110 SPENQ96T58 3664 aaKnown RBP10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 IGLC7A0M8Q6 106 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 E7EQL1 145 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 M0R3E3 92 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 FCN3O75636 299 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 EBLN2Q6P2I7 272 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 ZNF841Q6ZN19 808 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 ASCL5Q7RTU5 278 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 hDV102S1A0JD36 115 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 CT45A10P0DMU9 189 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 LINC00173Q6ZV60 143 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 ALKBH7Q9BT30 221 aaPredicted RBP10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 TMEM70Q9BUB7 260 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 SIGLEC9Q9Y336 463 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 ESDP10768 282 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 ZNF596Q8TC21 504 aa10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 RBM14Q96PK6 669 aaKnown RBP10.32□□□□□ -0.76
HMGCS1-201ENST00000325110 GNG7O60262 68 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 IGLV2-23P01705 113 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 TMEM11P17152 192 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 TMEM155Q4W5P6 130 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 OR8B3Q8NGG8 313 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 C17orf77Q96MU5 243 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 CREBBPQ92793 2442 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 IGHV1-3A0A0C4DH29 117 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms